Job Description P28247 Confidence 6.06% Date Thu Jan 5 11:44:32 GMT 2012 Rank 36 Aligned Residues 85 % Identity 18% Template c2epgB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein ttha1785; PDBTitle: crystal structure of ttha1785 Resolution 2.10 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.											.	.	.	.												.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query Sequence		L	R	L	I	E	H	E	V	T	W	T	V	L	L	R	Q	R	V	A	I	V	S	D	I	M	F	R	K	Q	F	E	R	C	I	T	.	.	.	.	.	.	.	.	.	.	D	D	F	A	.	.	.	.	.	.	.	.	.	.	.	I	D	G	D	T	I	A	A	D	F	T	P	G	N	.	.	.	.	.	.
Query Conservation																																					.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	A	X	A	A	A	A	N	F	A	F	A	N	R	Q	L	I	A	H	F	V	R	E	A	F	E	K	V	G	F	T	P	R	D	H	G	L	R	V	L	Y	D	L	A	H	N	N	A	K	F	E	E	H	R	G	R	R	V	L	V	H	R	K	G	A	T	R	A	F	G	P	G	H	P	E	V	P	E	E
Template Known Secondary structure																														T	T																S									T	T									S							T	T		T	T	S		G	G
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
														112	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.															.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.															.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	T	A	N	A	E	L	L	C	D	K	F	I	K	.	.	S	H	V	C	D	F	A	C	K	N	G	G	R	A	L	T	R	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.															.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation
Template Sequence		Y	R	R	V	G	Q	P	V	L	V	P	G	D	X	G	R	Y	S	Y	V	L	A	G	T	E	K	A	X	E	V	S	F	G	S	S	C	H	G	A	G	R	N	L	V	K	E
Template Known Secondary structure		G	T	T	T									S	T	T	S															S	S	S						S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions