Job Description P76551 Confidence 99.80% Date Thu Jan 5 12:24:28 GMT 2012 Rank 11 Aligned Residues 256 % Identity 18% Template c3iucC_ PDB info PDB header:chaperone Chain: C: PDB Molecule:heat shock 70kda protein 5 (glucose-regulated PDBTitle: crystal structure of the human 70kda heat shock protein 52 (bip/grp78) atpase domain in complex with adp Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.									.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Query Sequence		M	N	T	R	Q	L	L	S	V	G	I	D	I	G	T	T	T	T	Q	V	I	F	S	R	L	E	.	.	.	.	.	.	.	.	L	V	N	R	A	A	V	S	Q	V	P	R	Y	E	F	I	K	R	E	I	S	W	Q	S	P	V	F	F	T	P	V	D	K	Q	G	G	L	K	E	.	.	.	.	.	.	.
Query Conservation																												.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Alig confidence								.	.																			.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Conservation								.	.
Template Sequence		M	D	V	G	T	V	.	.	V	G	I	D	L	G	T	T	Y	S	C	V	G	V	F	K	N	G	R	V	E	I	I	A	N	D	Q	G	N	R	I	T	P	S	Y	V	A	F	T	P	E	G	E	R	L	I	G	D	A	A	K	N	Q	L	T	S	N	P	E	N	T	V	F	D	A	K	R	L	I	G	R	T
Template Known Secondary structure		S	S	B				.	.							S	S									T	T								T	T	S		S	S									T	T	S					T					T	T	T	T	T		S	T	T					G	G	G	T	T	T
Template Predicted Secondary structure								.	.
Template SS confidence
		25	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
																																											66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	L	K	T	L	I	L	E	Q	Y	H	A	A	G	I	E	P	E	S	V	D	S	G	A	I	I	I	T	G	E	S	A	K	T	R	N	A	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	N	D	P	S	V	Q	Q	D	I	K	F	L	P	F	K	V	V	E	K	K	T	K	P	Y	I	Q	V	D	I	G	G	G	Q	T	K	T	F	A	P	E	E	I	S	A	M	V	L	T	K	M	K	E	T	A	E	A	Y	L	G	K	K	V	T	H	A	V	V	T	V	P	A	Y	F	N	D	A	Q	R	Q
Template Known Secondary structure		T	T									T	T		S	S						T	T									S	T	T																											T	S	B										T	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.						.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.
Query Sequence		P	A	V	M	A	L	S	Q	S	L	G	D	F	V	V	A	S	A	G	P	H	L	E	S	V	I	A	G	H	G	A	G	A	Q	T	L	S	E	Q	R	L	C	R	V	L	N	I	D	I	G	G	G	T	A	N	Y	A	L	F	D	A	G	K	.	.	.	.	.	I	S	G	T	A	C	L	N	V	G	G	R
Query Conservation																																																																	.	.	.	.	.
Alig confidence																				.	.	.	.										.	.	.	.																													.	.	.	.	.
Template Conservation																				.	.	.	.										.	.	.	.
Template Sequence		A	T	K	D	A	G	T	I	A	G	L	N	V	M	R	I	I	N	.	.	.	.	E	P	T	A	A	A	I	A	Y	.	.	.	.	G	L	D	K	G	E	K	N	I	L	V	F	D	L	G	G	G	T	F	D	V	S	L	L	T	I	D	N	G	V	F	E	V	V	A	T	N	G	D	T	H	L	G	G	E
Template Known Secondary structure											T									.	.	.	.									T	.	.	.	.	T	T	T													S	S											T	T											T	T		S
Template Predicted Secondary structure																				.	.	.	.										.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		180	.	.	.	.	.	.																				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.							.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query Sequence		L	L	E	T	D	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	V	V	Y	A	H	K	P	G	Q	M	I	V	D	E	C	F	G	A	.	.	.	.	.	.	G	T	D	A	R	S	L	T	G	A	Q	L	V	Q	V	T	R	R	M	A	E	L	I	V	E	V	I	D
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	D	Q	R	V	M	E	H	F	I	K	L	Y	K	K	K	T	G	K	D	V	R	K	D	N	R	A	V	Q	K	L	R	R	E	V	E	K	A	K	R	A	L	S	S	Q	H	Q	A	R	I	E	I	E	S	F	Y	E	G	E	D	F	S	E	T	L	T	R	A	K	F	E	E	L	N	M	D	L	F	R
Template Known Secondary structure																				S				T	T																				T	T	S	S											T	T																T
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	L	S	P	L	A	Q	A	L	M	Q	T	G	L	L	P	A	G	V	T	P	E	I	I	T	L	S	G	G	V	G	E	C
Query Conservation
Alig confidence																						.	.
Template Conservation																						.	.
Template Sequence		S	T	M	K	P	V	Q	K	V	L	E	D	S	D	L	K	K	S	D	I	.	.	D	E	I	V	L	V	G	G	S	T	R	I
Template Known Secondary structure		T	T											T	T			G	G	G		.	.							S	G	G	G	G
Template Predicted Secondary structure																						.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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