|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | T | R | Q | L | L | S | V | G | I | D | I | G | T | T | T | T | Q | V | I | F | S | R | L | E | L | V | N | R | A | A | V | S | Q | V | P | R | Y | E | F | I | K | R | E | I | S | W | Q | S | P | V | F | F | T | P | V | D | K | Q | G | G | L | K | E | A | E | L | K | T | L | I | L | E | Q | Y | H | A | A | G |
Query Conservation |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|   |   |
|
|
|   |   |   |
|
|
|
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |
|   |   |
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|
Template Sequence |   |
N | P | L | P | P | P | Y | K | V | G | V | D | L | G | T | A | D | I | V | L | V | V | T | D | Q | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | I | P | V | A | G | A | L | K | W | A | S | V | V | K | D | G | L | V | V | D | Y | I | G | A | I | Q | I | V | R | E | L | K | A | K | V | E |
Template Known Secondary structure |   |
|
|
|
| S |
|
|  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |
| T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  | T | T |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
Predicted Secondary structure |   |
|
|  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | E | P | E | S | V | D | S | G | A | I | I | I | T | G | E | S | A | K | T | R | N | A | R | P | A | V | M | A | L | S | Q | S | L | G | D | F | V | V | A | S | A | G | P | H | L | E | S | V | I | A | G | H | G | A | G | A | Q | T | L | S | E | Q | R | L | C | R | V | L | N | I | D | I | G | G | G | T | A | N | Y |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |
|   |   |
|
|
|
|   |
|   |   |   |   |
|   |   |
|   |
|
|
|
|   |
|   |
|
|   |
|
|   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|
|   |   |   |   |
|
|   | . | . | . | . |
|
|   |
|
|
|   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|
|
|
|
|   |
|
|   |
|
Template Sequence |   |
R | L | L | G | S | E | L | F | Q | A | A | T | A | I | P | P | G | T | V | G | R | N | A | E | A | C | G | H | V | V | A | G | A | G | L | E | L | V | T | L | V | D | . |
. |
. |
. |
E | P | V | A | A | A | R | A | L | G | . |
. |
. |
. |
. |
. |
. |
. |
I | N | D | G | I | V | V | D | I | G | G | G | T | T | G | I |
Template Known Secondary structure |   |
 |  | S | S | S |
|
|
|  |  |  |  |  |  |
| T | T |
|
| G | G | G | G | G |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | . |
| S | S |  |  |  |  |  |  |
| S | S |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . | . | . |
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | |
|
|
|
. | . | . | . | . | 130 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | F | D | A | G | K | I | S | G | T | A | C | L | N | V | G | G | R | L | L | E | T | D | S | H | G | R | V | V | Y | A | H | K | P | G | Q | M | I | V | D | E | C | F | G | A | G | T | D | A | R | S | L | T | G | A | Q | L | V | Q | V | T | R | R | M | A | E | L | I | V | E | V | I | D | G | T | L | S | P | L |
Query Conservation |   |
  |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|   |
|
|
|   |
|   |
|   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
A | V | I | E | K | G | K | I | T | A | T | F | D | E | P | T | G | G | T | H | L | S | L | V | L | A | G | S | Y | K | I | P | F | E | E | A | E | T | I | K | K | D | F | S | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | R | E | I | X | R | V | V | R | P | V | I | E | K | X | A | L | I | V |
Template Known Secondary structure |   |
 |  |  |  | T | T |  |  |  |  |  |  |  |  | S |
|
| T |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |  |  |  |  | T |
| G | G | G | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
  |
  |   |
241 | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | A | L | M | Q | T | G | L | L | P | A | G | V | T | P | E | I | I | T | L | S | G | G | V | G | E | C |
Query Conservation |   |
  |   |   |
|
|   |
|
|
|
|   |   |
|
|   |   |   |
|
|
|
|
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   | . | . | . | . | . | . |   |
|   |   |
|
|
|   |
|
|   |
|   |
|
Template Sequence |   |
K | E | V | I | K | N | Y | D | . |
. |
. |
. |
. |
. |
Q | T | L | P | V | Y | V | V | G | G | T | A | Y | L |
Template Known Secondary structure |   |
 |  |  |  |  | T | S |
| . | . | . | . | . | . | T | T |
|
|  |  |  |  | S | G | G | G | G | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
215 | . | . | . | . | 220 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
  |