Job Description P76551 Confidence 99.75% Date Thu Jan 5 12:24:28 GMT 2012 Rank 14 Aligned Residues 225 % Identity 20% Template c2ychA_ PDB info PDB header:cell cycle Chain: A: PDB Molecule:competence protein pilm; PDBTitle: pilm-piln type iv pilus biogenesis complex Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	R	Q	L	L	S	V	G	I	D	I	G	T	T	T	T	Q	V	I	F	S	R	L	E	L	V	N	R	A	A	V	S	Q	V	P	R	Y	E	F	I	K	R	E	I	S	W	Q	S	P	V	F	F	T	P	V	D	K	Q	G	G	L	K	E	A	E	L	K	T	L	I	L	E	Q	Y	H	A	A	G	I
Query Conservation
Alig confidence						.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	R	V	E	.	.	A	L	G	L	E	I	G	A	S	A	L	K	L	V	E	V	S	G	N	P	P	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	L	A	S	R	P	T	P	P	G	L	L	X	E	G	X	V	A	E	P	A	A	L	A	Q	E	I	K	E	L	L	L	E	A	R	T
Template Known Secondary structure						.	.								S	S									T	T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	S			T	T			S																	T
Template Predicted Secondary structure						.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.															.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		82	.	.	.	.																																																								.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	P	E	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	G	A	I	I	I	T	G	E	S	A	K	T	R	N	A	R	P	A
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	R	Y	V	V	T	A	L	S	N	L	A	V	I	L	R	P	I	Q	V	P	K	X	P	L	K	E	X	E	E	A	V	R	W	E	A	E	R	Y	I	P	F	P	I	E	V	V	L	D	F	A	P	L	T	P	L	S	E	V	Q	E	G	E	Q	V	Q	V	X	V	A	A	A	R	Q	E	A	V	A	G
Template Known Secondary structure												G	G	G																									G	G	G		S	S											S	S		G	G	G	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	A	L	S	Q	S	L	G	D	F	V	V	A	S	A	G	P	H	L	E	S	V	I	A	G	H	G	A	G	A	Q	T	L	S	E	Q	R	L	C	R	V	L	N	I	D	I	G	G	G	T	A	N	Y	A	L	F	D	A	G	K	I	S	G	T	A	C	L	N	V	G	G	R	L	L	E	T	D	S	H
Query Conservation
Alig confidence																		.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		V	L	E	A	L	R	G	A	G	L	V	P	V	V	L	D	.	.	.	.	V	K	P	F	A	G	L	Y	P	L	E	A	R	L	A	E	E	P	D	R	V	F	L	V	L	D	I	G	A	E	S	T	S	L	V	L	L	R	G	D	K	P	L	A	V	R	V	L	T	L	S	G	K	D	F	T	E	A	I	A
Template Known Secondary structure									T	T								.	.	.	.						T	T	G	G	G						T	S	T	T										S	S									T	T									S		S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	V	V	Y	A	H	K	P	G	Q	M	I	V	D	E	C	F	G	A	G	T	D	A	R	S	L	T	G	A	Q	L	V	Q	V	T	R	R	M	A	E	L	I	V	E	V	I	D	G	T	L	S	P	L	A	Q	A	L	M	Q	T	G	L	L	P	A	G	V	T	P	E	I	I	T	L	S	G	G	V	G
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.
Template Sequence		R	S	F	N	L	D	L	L	A	A	E	E	V	K	R	T	Y	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	D	A	I	R	P	V	L	V	E	L	T	Q	E	L	R	R	S	L	E	F	F	R	I	Q	L	S	P	.	.	.	.	.	.	.	E	V	G	Y	L	L	G	G	G	S
Template Known Secondary structure				T	T													T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	S						S	G	G	G
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250																.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.								280	.	.	.	.	.	.	.	.	.
		267	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L
Template Known Secondary structure		G	S
Template Predicted Secondary structure
Template SS confidence
		318	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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