Job Description P76551 Confidence 74.94% Date Thu Jan 5 12:24:28 GMT 2012 Rank 118 Aligned Residues 233 % Identity 15% Template c2ivoC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:up1; PDBTitle: structure of up1 protein Resolution 2.9 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	V	G	I	D	I	G	T	T	T	T	Q	V	I	F	S	R	L	E	L	V	N	R	A	A	V	S	Q	V	P	R	Y	E	F	I	K	R	E	I	S	W	Q	S	P	V	F	F	T	P	V	D	K	Q	G	G	L	K	E	A	E	L	K	T	L	I	L	E	Q	Y	H	A	A	G	I	E	P	E	S	V
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.																														.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.																														.	.	.	.
Template Sequence		L	A	L	G	I	E	G	T	A	H	T	L	G	I	G	I	V	S	.	.	.	.	.	.	.	.	E	D	K	V	L	A	N	V	F	D	T	L	T	T	E	K	G	G	I	H	P	K	E	A	A	E	H	H	A	.	.	.	.	R	L	M	K	P	L	L	R	K	A	L	S	E	A	G	V	S	L	D	D	I
Template Known Secondary structure									S	S	S									.	.	.	.	.	.	.	.	S	S													S	S		S												.	.	.	.															T			T	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.																														.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.									20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		D	S	G	A	I	I	I	T	G	E	S	A	K	T	.	R	N	A	R	P	A	V	M	A	L	S	Q	S	L	G	D	F	V	V	A	S	A	G	P	H	L	E	S	V	I	A	G	H	G	A	G	A	Q	T	L	S	E	Q	R	L	C	R	V	L	N	I	D	I	G	G	G	T	A	N	Y	A	L	F	D	A
Query Conservation																.
Alig confidence																.																							.	.									.	.	.	.										.	.	.
Template Conservation																																							.	.									.	.	.	.										.	.	.
Template Sequence		D	V	I	A	F	S	Q	G	P	G	L	G	P	A	L	R	V	V	A	T	A	A	R	A	L	A	V	K	Y	R	K	P	I	V	G	V	N	.	.	H	C	I	A	H	V	E	I	.	.	.	.	T	K	M	F	G	V	K	D	P	.	.	.	V	G	L	Y	V	S	G	G	N	T	Q	V	L	A	L	E	G
Template Known Secondary structure										S	S																			T	T								.	.								G	.	.	.	.	G	G	G	G	T			S		.	.	.							S	S									T
Template Predicted Secondary structure																																							.	.									.	.	.	.										.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		166			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.																		.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure			.	.																						.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.																						.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	.	.	K	I	S	G	T	A	C	L	N	V	G	G	R	L	L	E	T	D	S	H	G	.	R	V	V	Y	A	H	K	P	G	Q	M	I	V	D	E	C	F	G	A	G	T	D	A	R	S	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	Q	L	V	Q	V	T	R	R	M
Query Conservation			.	.																						.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.																						.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	Y	R	V	F	G	E	T	L	D	I	G	I	G	N	A	I	D	V	F	A	R	E	L	G	L	G	F	P	G	G	P	K	V	E	K	L	A	E	K	G	E	K	Y	I	E	L	P	Y	A	V	K	G	M	D	L	S	F	S	G	L	L	T	E	A	I	R	K	Y	R	S	G	K	Y	R	V	E	D	L
Template Known Secondary structure		T								B	S	S	S													T	T			S	S											T			S										T	T																	T			S
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		226	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		A	E	L	I	V	E	V	I	D	G	T	.	L	S	P	L	A	Q	A	L	M	Q	T	G	L	L	P	A	G	V	T	P	E	I	I	T	L	S	G	G	V	G	E
Query Conservation													.
Alig confidence													.														.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.
Template Sequence		A	Y	S	F	Q	E	T	A	F	A	A	L	V	E	V	T	E	R	A	V	A	H	T	E	K	.	.	.	.	.	.	.	D	E	V	V	L	V	G	G	V	A	A
Template Known Secondary structure																											.	.	.	.	.	.	.	S						S	G	G	G	G
Template Predicted Secondary structure																											.	.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.								.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions