Return to main results Retrieve Phyre Job Id

Job DescriptionP76551
Confidence56.16%DateThu Jan 5 12:24:28 GMT 2012
Rank124Aligned Residues120
% Identity18%Templatec1x3nA_
PDB info PDB header:transferaseChain: A: PDB Molecule:propionate kinase; PDBTitle: crystal structure of amppnp bound propionate kinase (tdcd) from2 salmonella typhimurium
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   139140.........150.........160.........170 .........180.........190.........200..
Predicted Secondary structure 













................





Query SS confidence 































. . . . . . . . . . . . . . . .































Query Sequence  TLSEQRLCRVLNIDIGGGTANYALFDAGKISG. . . . . . . . . . . . . . . . TACLNVGGRLLETDSHGRVVYAHKPGQMIVDE
Query Conservation 
       
 









 
 
   
    ................  

 


     
    
 
    

 

  
Alig confidence 























.






................







.










.










Template Conservation 


      






 
 

 

.  








 





 
 



 


  .
  
      
.  
    

  
Template Sequence  LDLDEKDSGLIVAHLGNGASICAV. RNGQSVDTSMGMTPLEGLMMGTRSGDVDFGA. MAWIAKETGQT. LSDLERVVNKE
Template Known Secondary structure  TT
BTTB
SSS.TTS

SSTTSSS

SS


S

.T

.S
Template Predicted Secondary structure 








.






















.



.

Template SS confidence 















































































   190.........200.........210... ......220.........230.........240.... .....250..... ....260......
 
   203......210.........220.... .....230.........240.........250.........260.......
Predicted Secondary structure 










....











Query SS confidence 





















. . . .










































Query Sequence  CFGAGTDARSLTGAQLVQVTRR. . . . MAELIVEVIDGTLSPLAQALMQTGLLPAGVTPEIITLSGGVGE
Query Conservation   
     
    
      
 
....
 


 
 
  
   
   

 



  

   








 
Alig confidence 





















....

























......










Template Conservation 


 
 

 
 
 
 
      

  
 

 
 
 


 
 


  
 



......










Template Sequence  SGLLGISGLSSDLRVLEKAWHEGHERARLAIKTFVHRIARHIAGHAASLHRL. . . . . . DGIIFTGGIGE
Template Known Secondary structure 
SS
S
TT
TT
SS
......
Template Predicted Secondary structure 












......






Template SS confidence 




































































   267..270.........280.........290.........300.........310........ .320.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions