|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | T | R | Q | L | L | S | V | G | I | D | I | G | T | T | T | T | Q | V | I | F | S | R | L | E | L | V | N | R | A | A | V | S | Q | V | P | R | Y | E | F | I | K | R | E | I | S | W | Q | S | P | V | F | F | T | P | V | D | K | Q | G | G | L | K | E | A | E | L | K | T | L | I | L | E | Q | Y | H | A | A | G |
Query Conservation |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|   |   |
|
|
|   |   |   |
|
|
|
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
| . | . | . | . |   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
I | X | R | . |
. |
. |
. |
V | A | S | I | D | I | G | S | Y | S | V | R | L | T | I | A | Q | I | K | D | G | K | L | S | I | I | L | E | R | G | R | I | T | S | L | G | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | V | K | E | T | G | R | L | Q | E | D | R | I | E | E | T | I | Q | V | L | K | E | Y | K | K |
Template Known Secondary structure |   |
|
|  | . | . | . | . |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  | S | S | S | S |  |  |  |  |  |  |  |  |  |  |
|
| T | T | T | . | . | . | . | . | . | . | . | . | . | . | T |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  | . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
8 | . | 10 | |
|
|
|
. | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
  |
  |   |
|
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. |
|
|  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
I | E | P | E | S | V | D | S | G | A | I | I | I | T | G | E | S | A | K | T | R | N | A | R | P | A | V | M | A | L | S | Q | S | L | G | D | F | V | V | A | S | A | G | P | H | L | E | S | V | I | A | G | H | G | A | G | A | Q | T | L | S | E | Q | R | L | C | R | V | L | N | I | D | I | G | G | G | T | A | N |
Query Conservation |   |
. |   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |
|   |   |
|
|
|
|   |
|   |   |   |   |
|   |   |
|   |
|
|
|
|   |
|   |
|
|   |
|
|   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
|
|   |
|   |
| . |
|
|   |   |   |   |   |   |
|   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
Template Sequence |   |
L | I | D | E | F | K | V | E | R | X | K | A | V | A | T | E | A | I | R | R | A | K | N | A | E | E | F | L | E | R | V | K | R | E | V | G | L | V | V | E | V | I | T | P | E | Q | . |
E | G | R | Y | A | Y | L | A | V | A | . |
. |
. |
Y | S | L | K | P | E | G | E | V | X | V | V | D | Q | G | G | G | S | T | E |
Template Known Secondary structure |   |
 |  |  |  | T | T |
| S |  |  |  |  |  |  |
| T | T | G | G | G | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |
|
|
| S | S |  |  |  |  |  |  |  | T | T |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  | . |  |  |  |  |  |  |  |  |  |  | . | . | . |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
. | 120 | . | . | . | . | . | . | . | . | |
|
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
  |
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | A | L | F | D | A | G | K | I | S | G | T | A | C | L | N | V | G | G | R | L | L | E | T | D | S | H | G | R | V | V | Y | A | H | K | P | G | Q | M | I | V | D | E | C |
Query Conservation |   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |
|
|   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
Y | V | F | G | K | G | Y | K | V | R | E | V | I | S | L | P | I | G | I | V | N | L | T | E | T | F | F | K | Q | D | P | P | T | E | E | E | V | K | R | F | F | E | F | L |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
| S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
  |