Job Description P76551 Confidence 99.84% Date Thu Jan 5 12:24:28 GMT 2012 Rank 9 Aligned Residues 260 % Identity 17% Template c1jcgA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:rod shape-determining protein mreb; PDBTitle: mreb from thermotoga maritima, amppnp Resolution 3.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.									.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		M	N	T	R	Q	L	L	S	V	G	I	D	I	G	T	T	T	T	Q	V	I	F	S	R	L	E	L	V	N	R	A	A	V	.	.	.	.	.	.	.	.	S	Q	V	P	R	Y	E	F	I	K	R	E	I	S	W	Q	S	P	.	.	.	V	F	F	T	P	V	D	K	Q	G	G	L	K	E	A	E	L	K
Query Conservation																																			.	.	.	.	.	.	.	.																			.	.	.
Alig confidence							.	.	.																										.	.	.	.	.	.	.	.																			.	.	.
Template Conservation							.	.	.
Template Sequence		M	L	R	K	D	.	.	.	I	G	I	D	L	G	T	A	N	T	L	V	F	L	R	G	K	G	I	V	V	N	E	P	S	V	I	A	I	D	S	T	T	G	E	I	L	K	V	G	L	E	A	K	N	M	I	G	K	T	P	A	T	I	K	A	I	R	P	M	R	D	G	V	I	A	D	Y	T	V	A	L
Template Known Secondary structure				S			.	.	.							S	S							T	T	T								S						T	T	T							S					T	T	T	T	S			T	T									T	T			S	S
Template Predicted Secondary structure							.	.	.
Template SS confidence
		1	.	.	.	.				.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	I	L	E	Q	Y	H	A	A	G	I	E	P	E	S	V	D	S	G	A	I	I	I	T	G	E	S	A	K	T	R	N	A	R	P	A	V	M	A	L	S	Q	S	L	G	D	F	V	V	A	S	A	G	P	H	L	E	S	V	I	A	G	H	G	A	G	A	Q	T	L	S	E	Q	R	L	C	R	V	L
Query Conservation
Alig confidence																																																							.	.	.	.											.	.	.
Template Conservation																																																							.	.	.	.											.	.	.
Template Sequence		V	M	L	R	Y	F	I	N	K	A	K	G	G	M	N	L	F	K	P	R	V	V	I	G	V	P	I	G	I	T	D	V	E	R	R	A	I	L	D	A	G	L	E	A	G	A	S	K	V	F	L	I	E	.	.	.	.	E	P	M	A	A	A	I	G	S	N	.	.	.	L	N	V	E	E	P	S	G	N	M
Template Known Secondary structure													T	S			S	S										S	S															T	T	T		S							.	.	.	.								T	T	T	.	.	.			S	S	S	S	S
Template Predicted Secondary structure																																																							.	.	.	.											.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.							.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																			.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	D	I	G	G	G	T	A	N	Y	A	L	F	D	A	G	K	I	S	G	T	A	C	L	N	V	G	G	R	L	L	E	.	.	.	.	.	.	T	D	S	H	G	R	V	V	Y	A	H	K	P	G	Q	M	I	V	D	E	C	F	G	A	G	T	D	A	R	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																			.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	D	I	G	G	G	T	T	E	V	A	V	I	S	L	G	S	I	V	T	W	E	S	I	R	I	A	G	D	E	M	D	E	A	I	V	Q	Y	V	R	E	T	Y	R	V	A	I	G	E	R	T	A	E	R	V	K	I	E	I	G	N	V	F	P	S	K	E	N	D	E	L	E	T	T	V	S	G	I	D
Template Known Secondary structure							S	S									T	T									S		S																																		B		S							T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
				212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure		.	.																																							.
Query SS confidence		.	.																																							.
Query Sequence		.	.	S	L	T	G	A	Q	L	V	Q	V	T	R	R	M	A	E	L	I	V	E	V	I	D	G	T	L	S	P	L	A	Q	A	L	M	Q	T	G	L	.	L	P	A	G	V	T	P	E	I	I	T	L	S	G	G	V	G	E	C	Y	R
Query Conservation		.	.																																							.
Alig confidence		.	.																																							.
Template Conservation
Template Sequence		L	S	T	G	L	P	R	K	L	T	L	K	G	G	E	V	R	E	A	L	R	S	V	V	V	A	I	V	E	S	V	R	T	T	L	E	K	T	P	P	E	L	V	S	D	I	I	E	R	G	I	F	L	T	G	G	G	S	L	L	R	G
Template Known Secondary structure		T	T	T	T																																	T	S																	S	G	G	G		S	B	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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