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Job DescriptionP76551
Confidence99.69%DateThu Jan 5 12:24:28 GMT 2012
Rank18Aligned Residues253
% Identity19%Templatec1hpmA_
PDB info PDB header:hydrolase (acting on acid anhydrides)Chain: A: PDB Molecule:44k atpase fragment (n-terminal) of 7o kd heat- PDBTitle: how potassium affects the activity of the molecular2 chaperone hsc70. ii. potassium binds specifically in the3 atpase active site
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20..... ....30.........40.........50.........60
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Query Sequence  VGIDIGTTTTQVIFSRL. . . . ELVNRAAVSQVPRYEFIKREISWQSPVFFTPVDKQ. . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSD
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SSTT


TTS
SS


SS
TTTTTT
GGG

GGGTTT

TT
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   61........70.........80.........90.........100.........110....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . GGLKEAELKTLILEQYHAAGIEPESVDSGAIIITGESAKTRNARPAVMALSQSL
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Template Sequence  MKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAG
Template Known Secondary structure  TT
SSTTTT
TS



TT

TT
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   115....120.........130.........140.........150.........160....... ..170.........180..
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Query Sequence  GDFVVASAGPHLESVIAGHGAGAQTLSEQRLCRVLNIDIGGGTANYALFDAGK. . . . . ISGTACLNVGGRLLE. . . . . . .
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Template Sequence  LNVLRIIN. . . . EPTAAAIAY. GLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF
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   167..170.... .....180... ......190.........200.........210.........220.........230.........240.
 
   183......190.........200.........210... ......220.........230.........240....
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Query Sequence  . . . . . . . . . . . . TDSHGRVVYAHKPGQMIVDECFGAGTDARSL. . . . . . TGAQLVQVTRRMAELIVEVIDGTLSPLAQAL
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Template Sequence  IAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKAL
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   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   245....250.........260........
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Query Sequence  MQTGLLPAGVTPEIITLSGGVGEC
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Template Sequence  RDAKLDKSQI. . HDIVLVGGSTRI
Template Known Secondary structure  T

GGG
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SGGGG
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   322.......330. ........340...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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