 |
Job Description | P0AGE9 | Confidence | 97.84% | Date | Thu Jan 5 11:28:55 GMT 2012 |
Rank | 93 | Aligned Residues | 115 |
% Identity | 19% | Template | d1e5qa1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
|
Resolution | 2.1 |
|
 |
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
. | . | . | . | 40 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|  |  |  |
|  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | N | T | K | V | I | C | Q | G | F | T | G | S | Q | G | T | F | H | S | E | Q | A | I | A | Y | G | T | K | M | . |
V | G | G | V | T | P | G | K | G | . |
. |
. |
. |
. |
. |
. |
. |
G | T | T | H | L | G | L | P | V | F | N | T | V | R | E | A | V | A | A | T | G | A | T | A | S | V | I | Y | V | P | A | P | F |
Query Conservation |   |
  |   |
|   |
|   |
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   | . |
|   |   |
|   |
|   |   |   | . | . | . | . | . | . | . | . |
|   |   |
|   |
|   |   |   |
|   |
|
|   |
|
|   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |
|
|
|
| . |
|   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |   |
|
|   |   |   |
Template Sequence |   |
A | T | K | S | V | L | M | L | G | S | . |
G | F | V | T | R | P | T | L | D | V | L | T | D | S | G | I | K | V | T | V | A | C | R | T | L | E | S | A | K | K | L | S | A | G | V | Q | H | S | T | P | I | S | L | D | V | N | D | D | A | A | L | D | A | E | V | A | K | H | D | L | V | I | S | L | I | P | Y | T | F |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |
|
| . | S | T | T |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  | T | T |
| T | T |  |  |  |  |  |
|
| T | T |
|  |  |  |  |  |  |  |  | T | T | S | S |  |  |  |  |
| S |
| G | G | G |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | |
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | K | D | S | I | L | E | A | I | D | A | G | I | K | L | I | I | T | I | T | E | G | I | P | T | L | D | M | L | T | V | K | V | K | L | D | E | A | G | V | R | M | I | G | P | N | C | P | G | V |
Query Conservation |   |
|   |   |   |
|   |
|   |   |   |   |
|
|
|   |   |
|
|   |
|   |
|
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |
|
|
| . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   | . | . |   |   |   |   |
|   |
Template Sequence |   |
H | A | T | V | I | K | S | A | I | R | Q | K | K | H | . |
. |
. |
V | V | T | T | S | Y | V | S | P | A | M | M | E | L | D | Q | A | A | K | D | A | G | I | T | V | . |
. |
M | N | E | I | G | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T |
|  | . | . | . |  |  |
| S | S |
|
|
|  |  |  |  |  | T |  |  |  |  |  |  | T | T |
|  |  | . | . |  |
| S |
|
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . |
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
|
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
|
120 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|