Job Description P0AGE9 Confidence 97.15% Date Thu Jan 5 11:28:55 GMT 2012 Rank 143 Aligned Residues 176 % Identity 17% Template c3ojlA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:cap5o; PDBTitle: native structure of the udp-n-acetyl-mannosamine dehydrogenase cap5o2 from staphylococcus aureus Resolution 2.80 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.														.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	K	V	I	C	Q	G	F	T	G	S	Q	G	T	F	H	S	E	Q	A	I	A	Y	G	T	K	M	V	G	G	V	T	P	G	K	G	G	T	T	H	L	G	L	P	.	.	.	.	.	.	V	F	N	T	V	R	E	A	V	A	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	T	A	S
Query Conservation																																														.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																					.						.	.								.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																					.						.	.
Template Sequence		S	K	L	T	V	V	G	L	.	G	Y	I	G	L	P	T	S	I	M	F	A	K	H	G	V	D	V	L	G	.	V	D	I	N	Q	.	.	Q	T	I	D	K	L	Q	N	G	Q	I	S	I	E	E	P	G	L	Q	E	V	Y	E	E	V	L	S	S	G	K	L	K	V	S	T	T	P	E	A	S	D	V	F
Template Known Secondary structure										.	S	T	T											T	T						.			S			.	.								T	T			S	S			T	T											T	T	S					S	S					S
Template Predicted Secondary structure										.																					.						.	.
Template SS confidence
		1	.	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		70	.	.	.	.													.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		V	I	Y	V	P	.	.	.	.	.	.	.	.	.	.	.	.	A	P	F	C	K	D	S	I	L	E	A	I	D	A	.	G	I	K	L	I	I	T	I	T	E	G	I	P	T	L	D	M	L	T	V	K	V	K	L	D	E	A	G	V	R	M	I	G	P	N	C	P	G	V	I	T	P	G	E	C	K	I	G
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		I	I	A	V	P	T	P	N	N	D	D	Q	Y	R	S	C	D	I	S	L	V	M	R	A	L	D	S	I	L	P	F	L	K	K	G	N	T	I	I	V	E	S	T	I	A	P	K	T	M	D	D	F	V	K	P	V	I	E	N	L	G	F	T	I	G	E	D	I	Y	L	V	H	C	P	E	R	V	L	P	G
Template Known Secondary structure									B		S	S	T	T			B													G	G	G			T	T							S				T	T					T							T	T	T			B	T	T	T	B											S	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	P	G	H	I	H	K	P	G	K	V	G	I	V	S	R	S	G	T	L	T	Y	E	A	V	K	Q	T	T	D	Y	G	F	G	Q	S	T	C	V	G	I	G	G	D	P	I	P	G	S	N	F	I	D	I	L	E	M	F	E	K
Query Conservation
Alig confidence														.																															.	.	.	.	.	.	.	.
Template Conservation														.																															.	.	.	.	.	.	.	.
Template Sequence		K	I	L	E	E	L	V	H	N	N	R	I	.	I	G	G	V	T	K	A	C	I	E	A	G	K	R	V	Y	R	T	F	V	Q	G	E	M	I	E	T	D	A	R	.	.	.	.	.	.	.	.	T	A	E	M	S	K	L	M	E	N
Template Known Secondary structure										S				.				S	S												T	T	T			S									.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.																															.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.									.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions