Job Description P0AGE9 Confidence 100.00% Date Thu Jan 5 11:28:55 GMT 2012 Rank 5 Aligned Residues 277 % Identity 29% Template c3mwdB_ PDB info PDB header:transferase Chain: B: PDB Molecule:atp-citrate synthase; PDBTitle: truncated human atp-citrate lyase with citrate bound Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.									.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																				.	.															.												.	.	.	.	.	.	.	.																						.
Query SS confidence																				.	.															.												.	.	.	.	.	.	.	.																						.
Query Sequence		S	I	L	I	D	K	N	T	K	V	I	C	Q	G	F	T	G	S	.	.	Q	G	T	F	H	S	E	Q	A	I	A	Y	G	T	.	K	M	V	G	G	V	T	P	G	K	G	.	.	.	.	.	.	.	.	G	T	T	H	L	G	L	P	V	F	N	T	V	R	E	A	V	A	A	T	G	.	A	T	A	S
Query Conservation																				.	.															.												.	.	.	.	.	.	.	.																						.
Alig confidence																				.	.															.												.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		T	T	L	F	S	R	H	T	K	A	I	V	W	G	X	Q	T	R	A	V	Q	G	X	L	D	F	D	Y	V	C	S	R	D	E	P	S	V	A	A	X	V	Y	P	F	T	G	D	H	K	Q	K	F	Y	W	G	H	K	E	I	L	I	P	V	F	K	N	X	A	D	A	X	R	K	H	P	E	V	D	V	L
Template Known Secondary structure		S					T	T							S																T	T		S	S		S							T	T	S		S								T	T									S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.									.	.	.	140
Predicted Secondary structure																				.																																																		.	.	.	.	.	.	.	.
Query SS confidence																				.																																																		.	.	.	.	.	.	.	.
Query Sequence		V	I	Y	V	P	A	P	F	C	K	D	S	I	L	E	A	I	D	.	A	G	I	K	L	I	I	T	I	T	E	G	I	P	T	L	D	M	L	T	V	K	V	K	L	D	E	A	G	V	R	M	I	G	P	N	C	P	G	V	I	T	P	G	E	C	K	I	G	.	.	.	.	.	.	.	.	I	Q	P	G
Query Conservation																				.																																																		.	.	.	.	.	.	.	.
Alig confidence																				.																																																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	F	A	S	L	R	S	A	Y	D	S	T	X	E	T	X	N	Y	A	Q	I	R	T	I	A	I	I	A	E	G	I	P	E	A	L	T	R	K	L	I	K	K	A	D	Q	K	G	V	T	I	I	G	P	A	T	V	G	G	I	K	P	G	C	F	K	I	G	N	T	G	G	X	L	D	N	I	L	A	S
Template Known Secondary structure							T	T	T									T	T	S	T	T									S																		T						S	S							T	T	T				T	T	T	T		S							T
Template Predicted Secondary structure
Template SS confidence
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		H	I	H	K	P	G	K	V	G	I	V	S	R	S	G	T	L	T	Y	E	A	V	K	Q	T	T	D	Y	G	F	G	Q	S	T	C	V	G	I	G	G	D	P	I	P	G	S	N	F	I	D	I	L	E	M	F	E	K	D	P	Q	T	E	A	I	V	M	I	G	E	.	I	G	G	S	A	E	E	E	A	A
Query Conservation																																																																							.
Alig confidence																																																																							.
Template Conservation
Template Sequence		K	L	Y	R	P	G	S	V	A	Y	V	S	R	S	G	G	X	S	N	E	L	N	N	I	I	S	R	T	T	D	G	V	Y	E	G	V	A	I	G	G	D	R	Y	P	G	S	T	F	X	D	H	V	L	R	Y	Q	D	T	P	G	V	K	X	I	V	V	L	G	E	I	G	G	T	E	E	Y	K	I	C	R
Template Known Secondary structure		T	T	T	S			S						S																S	S										S	S	S	S		S	S											T		T	T										S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		A	Y	I	K	E	H	V	T	K	P	V	V	G	Y	I	A	G	V	T	A	.	.	P	K	G	K	R	M	G	H	A	G	A	I	I	A	G	G	K	G	T	A	D	E	K	F	A	A	L	E	A	A	G	V	K	T	V	R	S	L	A	D	I	G	E
Query Conservation																						.	.
Alig confidence																						.	.														.	.	.	.
Template Conservation																																					.	.	.	.
Template Sequence		G	I	K	E	G	R	L	T	K	P	I	V	C	W	C	I	G	T	C	A	T	Q	A	S	E	T	A	V	A	K	N	Q	A	L	K	.	.	.	.	E	A	G	V	F	V	P	R	S	F	D	E	L	G	E	I	I	Q	S	V	Y	E	D	L	V	A
Template Known Secondary structure					T	T	S			S									T	T				G	G	G	S										.	.	.	.		T	T		B			S	S	G	G	G
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.					.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions