Job Description P0AGE9 Confidence 100.00% Date Thu Jan 5 11:28:55 GMT 2012 Rank 3 Aligned Residues 267 % Identity 51% Template c2yv2A_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa synthetase alpha chain; PDBTitle: crystal structure of succinyl-coa synthetase alpha chain from2 aeropyrum pernix k1 Resolution 2.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		L	I	D	K	N	T	K	V	I	C	Q	G	F	T	G	S	Q	G	T	F	H	S	E	Q	A	I	A	Y	G	T	K	M	V	G	G	V	T	P	G	K	G	G	T	T	H	L	G	L	P	V	F	N	T	V	R	E	A	V	A	A	T	G	.	A	T	A	S	V	I	Y	V	P	A	P	F	C	K	D	S	I
Query Conservation																																																																.
Alig confidence																																																																.
Template Conservation
Template Sequence		L	V	D	S	E	T	R	V	L	V	Q	G	I	T	G	R	E	G	S	F	H	A	K	A	M	L	E	Y	G	T	K	V	V	A	G	V	T	P	G	K	G	G	S	E	V	H	G	V	P	V	Y	D	S	V	K	E	A	L	A	E	H	P	E	I	N	T	S	I	V	F	V	P	A	P	F	A	P	D	A	V
Template Known Secondary structure				S	T	T							T	T	T	S														T									T	T		T	T				T	T					S	S									T	T										G	G	G
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	A	I	D	A	G	I	K	L	I	I	T	I	T	E	G	I	P	T	L	D	M	L	T	V	K	V	K	L	D	E	A	G	V	R	M	I	G	P	N	C	P	G	V	I	T	P	G	E	C	K	I	G	I	Q	P	G	H	I	H	K	P	G	K	V	G	I	V	S	R	S	G	T	L	T	Y	E	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	A	V	D	A	G	I	R	L	V	V	V	I	T	E	G	I	P	V	H	D	T	M	R	F	V	N	Y	A	R	Q	K	G	A	T	I	I	G	P	N	C	P	G	A	I	T	P	G	Q	A	K	V	G	I	M	P	G	H	I	F	K	E	G	G	V	A	V	V	S	R	S	G	T	L	T	Y	E	I	S
Template Known Secondary structure							T	T		S																									T						S	S	S						T	T	T					S			G	G	G											S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		K	Q	T	T	D	Y	G	F	G	Q	S	T	C	V	G	I	G	G	D	P	I	P	G	S	N	F	I	D	I	L	E	M	F	E	K	D	P	Q	T	E	A	I	V	M	I	G	E	I	G	G	S	.	A	E	E	E	A	A	A	Y	I	K	E	H	V	T	K	P	V	V	G	Y	I	A	G	V	T	A	P	K
Query Conservation																																																					.
Alig confidence																																																					.																										.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		Y	M	L	T	R	Q	G	I	G	Q	S	T	V	I	G	I	G	G	D	P	I	V	G	L	S	F	T	E	A	L	K	L	F	Q	E	D	P	Q	T	E	A	L	V	L	I	G	E	I	G	G	D	M	E	E	R	A	A	E	M	I	K	K	G	E	F	T	K	P	V	I	A	Y	I	A	G	R	T	.	.	.
Template Known Secondary structure							T	T											S	S	S	S		S	S											T		T	T		S								S	S	S	S											T	T	S			S							S				.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	R	M	G	H	A	G	A	I	I	A	G	G	K	G	T	A	D	E	K	F	A	A	L	E	A	A	G	V	K	T	V	R	S	L	A	D	I	G	E	A	L	K	T	V	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	Y	E	G	K	V	K	A	L	R	E	A	G	V	E	V	A	E	T	P	F	E	V	P	E	L	V	R	K	A	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S										T	T	T					S	S	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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