Job Description P0AGE9 Confidence 96.05% Date Thu Jan 5 11:28:55 GMT 2012 Rank 189 Aligned Residues 116 % Identity 16% Template c2ph5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:homospermidine synthase; PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54 Resolution 2.50 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.										.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.
Predicted Secondary structure																									.						.	.																				.	.	.	.	.	.	.	.	.											.	.
Query SS confidence																									.						.	.																				.	.	.	.	.	.	.	.	.											.	.
Query Sequence		N	T	K	V	I	C	Q	G	F	T	G	S	Q	G	T	F	H	S	E	Q	A	I	A	.	Y	G	T	K	M	.	.	V	G	G	V	T	P	G	K	G	G	T	T	H	L	G	L	P	V	F	.	.	.	.	.	.	.	.	.	N	T	V	R	E	A	V	A	A	T	.	.	G	A	T	A	S	V	I	Y	V
Query Conservation																									.						.	.																				.	.	.	.	.	.	.	.	.											.	.
Alig confidence											.														.						.	.																				.	.	.	.	.	.	.	.	.											.	.
Template Conservation											.
Template Sequence		K	N	R	F	V	I	L	G	F	.	G	C	V	G	Q	A	L	X	P	L	I	F	E	K	F	D	I	K	P	S	Q	V	T	I	I	A	A	E	G	T	K	V	D	V	A	Q	Q	Y	G	V	S	F	K	L	Q	Q	I	T	P	Q	N	Y	L	E	V	I	G	S	T	L	E	E	N	D	F	L	I	D	V	S
Template Known Secondary structure			S								.	S														B				G	G	G						S	S			S								T										T	T	T					T	G	G	G			T	T
Template Predicted Secondary structure											.
Template SS confidence
		13	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.						.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.																	.
Query SS confidence																															.	.	.	.	.																	.
Query Sequence		P	A	P	F	C	K	D	S	I	L	E	A	I	D	A	G	I	K	L	I	I	T	I	T	E	G	I	P	T	.	.	.	.	.	L	D	M	L	T	V	K	V	K	L	D	E	A	G	V	R	.	M	I	G	P	N	C
Query Conservation																															.	.	.	.	.																	.
Alig confidence																															.	.	.	.	.																	.
Template Conservation
Template Sequence		I	G	I	S	S	L	A	L	I	I	L	C	N	Q	K	G	A	L	Y	I	N	A	A	T	E	P	W	K	E	R	R	T	N	Y	S	L	R	E	E	V	L	R	L	K	D	K	T	Q	K	T	A	L	I	T	H	G	A
Template Known Secondary structure		S	S	S													T						S	S																			T	T	T	T	T			S					S		B	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions