 |
Job Description | P0AGE9 | Confidence | 97.87% | Date | Thu Jan 5 11:28:55 GMT 2012 |
Rank | 89 | Aligned Residues | 112 |
% Identity | 18% | Template | c2iz1C_ |
PDB info |
PDB header:oxidoreductase | Chain: C: PDB Molecule:6-phosphogluconate dehydrogenase, decarboxylating; |
PDBTitle: 6pdh complexed with pex inhibitor synchrotron data
|
Resolution | 2.30 Å |
|
 |
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
. | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
. | . | . | . | 70 | . | . | . | . | . | |
. | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . |  |  |  |
|
|
|
|
|
|
|
|  |  | . | . | . | . | . | . |  |
|  |  |
|
|
|
|  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |
|
|  | . |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Query Sequence |   |
N | T | K | V | I | C | Q | G | F | T | G | S | Q | G | T | F | H | S | E | Q | A | I | A | Y | G | T | K | M | . |
V | G | G | V | T | P | G | K | G | G | T | T | H | . |
. |
. |
. |
. |
. |
L | G | L | P | V | F | N | T | V | R | E | A | V | A | A | T | G | . |
A | T | A | S | V | I | Y | V | P | A | . |
P | F | C |
Query Conservation |   |
  |
|   |
|   |
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   | . |
|   |   |
|   |
|   |   |   |
|   |   |
| . | . | . | . | . | . |   |
|   |   |   |
|   |
|
|   |
|
|   |   |   |   |   | . |   |
|
|
|
|
|   |
|
|
| . |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
|   |   |
|
|   |
|
|
| . |
|   |
|
|   |   |
|
|   |
|
|   |   |   |
|   |   |
|   |
|
|
|
|   |   |   |   |   | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |
|   |   |
|   |   |
|
|
|
|
|
|   |
|
|   |   |   |   |
|
Template Sequence |   |
Q | A | N | F | G | V | V | G | M | . |
A | V | M | G | K | N | L | A | L | N | V | E | S | R | G | Y | T | V | A | I | Y | N | R | T | T | S | K | T | . |
E | E | V | F | K | E | H | Q | D | K | N | L | V | F | T | K | T | L | E | E | F | V | G | S | L | E | K | P | R | R | I | M | L | M | V | Q | A | G | A | A | T |
Template Known Secondary structure |   |
| B | S |  |  |  |  |
|
| . | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| S | S |  |  |  |  | . |  |  |  |  |  |  | T | T | T | S |
|  |  |  |
| S | S |  |  |  |  |  |  | T | B |
| S | S |
|  |  |  |  |
|
|
| T | T |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  | . |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | |
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | |
. | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | D | S | I | L | E | A | I | D | A | . |
G | I | K | L | I | I | T | I | T | E | G | I | P | T | L | D | M | L | T | V | K | V | K | L | D | E | A | G | V | R | M | I | G |
Query Conservation |   |
  |   |   |
|   |
|   |   |   |   | . |
|
|
|   |   |
|
|   |
|   |
|
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|
|
Template Sequence |   |
D | A | T | I | K | S | L | L | P | L | L | D | I | G | D | I | L | I | D | G | G | N | T | H | F | P | D | T | M | R | R | N | A | E | L | A | D | S | G | I | N | F | I | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | G | G | G |
|
| T | T |
|  |  |  |  |
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|