Job Description P0AGE9 Confidence 100.00% Date Thu Jan 5 11:28:55 GMT 2012 Rank 2 Aligned Residues 288 % Identity 64% Template c2fpgA_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa ligase [gdp-forming] alpha-chain, PDBTitle: crystal structure of pig gtp-specific succinyl-coa2 synthetase in complex with gdp Resolution 2.96 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	L	I	D	K	N	T	K	V	I	C	Q	G	F	T	G	S	Q	G	T	F	H	S	E	Q	A	I	A	Y	G	T	K	M	V	G	G	V	T	P	G	K	G	G	T	T	H	L	G	L	P	V	F	N	T	V	R	E	A	V	A	A	T	G	A	T	A	S	V	I	Y	V	P	A	P	F	C	K	D	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	L	Y	V	D	K	N	T	K	V	I	C	Q	G	F	T	G	K	Q	G	T	F	H	S	Q	Q	A	L	E	Y	G	T	N	L	V	G	G	T	T	P	G	K	G	G	K	T	H	L	G	L	P	V	F	N	T	V	K	E	A	K	E	Q	T	G	A	T	A	S	V	I	Y	V	P	P	P	F	A	A	A	A
Template Known Secondary structure		G	G				T	T							T	T	T	S														T									T	T		T	T				T	T					S												S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		I	L	E	A	I	D	A	G	I	K	L	I	I	T	I	T	E	G	I	P	T	L	D	.	M	L	T	V	K	V	K	L	D	E	A	G	V	R	M	I	G	P	N	C	P	G	V	I	T	P	G	E	C	K	I	G	I	Q	P	G	H	I	H	K	P	G	K	V	G	I	V	S	R	S	G	T	L	T	Y	E
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		I	N	E	A	I	D	A	E	V	P	L	V	V	C	I	T	E	G	I	P	Q	Q	D	M	V	R	V	K	H	R	L	L	R	Q	G	K	T	R	L	I	G	P	N	C	P	G	V	I	N	P	G	E	C	K	I	G	I	M	P	G	H	I	H	K	K	G	R	I	G	I	V	S	R	S	G	T	L	T	Y	E
Template Known Secondary structure								T	T		S							S																T		S	S						S	S	S						T	T	T					S	S		G	G	G											S		S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		A	V	K	Q	T	T	D	Y	G	F	G	Q	S	T	C	V	G	I	G	G	D	P	I	P	G	S	N	F	I	D	I	L	E	M	F	E	K	D	P	Q	T	E	A	I	V	M	I	G	E	I	G	G	S	A	E	.	.	.	.	E	E	A	A	A	Y	I	K	E	H	V	T	K	P	V	V	G	Y	I	A	G
Query Conservation																																																									.	.	.	.
Alig confidence																																																									.	.	.	.
Template Conservation
Template Sequence		A	V	H	Q	T	T	Q	V	G	L	G	Q	S	L	C	V	G	I	G	G	D	P	F	N	G	T	D	F	T	D	C	L	E	I	F	L	N	D	P	A	T	E	G	I	I	L	I	G	E	I	G	G	N	A	E	E	N	A	A	E	F	L	K	Q	H	N	S	G	P	K	S	K	P	V	V	S	F	I	A	G
Template Known Secondary structure									T	T											S	S	S	S		S												T		T	T										S	S	S	S													S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	P	K	G	K	R	M	G	H	A	G	A	I	I	A	G	G	K	G	T	A	D	E	K	F	A	A	L	E	A	A	G	V	K	T	V	R	S	L	A	D	I	G	E	A	L	K	T	V	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	A	P	P	G	R	R	M	G	H	A	G	A	I	I	A	G	G	K	G	G	A	K	E	K	I	T	A	L	Q	S	A	G	V	V	V	S	M	S	P	A	Q	L	G	T	T	I	Y	K	E	F	E
Template Known Secondary structure		T	T			T	T				S	S	T	T				B	T	T	B													T	T					S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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