Job Description P0AGE9 Confidence 100.00% Date Thu Jan 5 11:28:55 GMT 2012 Rank 7 Aligned Residues 257 % Identity 21% Template c2csuB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:457aa long hypothetical protein; PDBTitle: crystal structure of ph0766 from pyrococcus horikoshii ot3 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.				.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		M	S	I	L	I	D	K	N	T	K	V	I	C	Q	G	F	T	.	.	.	G	S	Q	G	T	F	H	S	E	Q	A	I	A	Y	G	T	K	M	V	G	G	V	T	P	G	K	G	G	T	T	H	L	G	L	P	V	F	N	T	V	R	E	A	V	A	A	T	G	A	T	A	S	V	I	Y	V	P	A	P	F
Query Conservation																			.	.	.
Alig confidence											.								.	.	.																											.	.																		.	.
Template Conservation											.																																					.	.																		.	.
Template Sequence		L	D	Y	F	F	N	P	K	G	.	I	A	V	I	G	A	S	N	D	P	K	K	L	G	Y	E	V	F	K	N	L	K	E	Y	K	K	G	K	V	Y	P	V	N	I	K	E	.	.	E	E	V	Q	G	V	K	A	Y	K	S	V	K	D	I	P	D	.	.	E	I	D	L	A	I	I	V	V	P	K	R	F
Template Known Secondary structure							S		S		.					T			S		T	T	S										T	T			S	S							T	T		.	.	S	B	S	S	S	S	B		B	S	S	T	T			S	S	.	.			S						S		G	G	G
Template Predicted Secondary structure											.																																					.	.																		.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																													.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.
Query Sequence		C	K	D	S	I	L	E	A	I	D	A	G	I	K	L	I	I	T	I	T	E	G	I	P	T	L	D	.	.	.	.	.	.	M	L	T	V	K	V	K	L	D	E	A	G	V	R	M	I	G	P	N	C	P	G	V	I	T	P	G	E	C	K	I	G	I	Q	P	G	H	I	H	K	P	G	K	V	G	I	V
Query Conservation																													.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.																																			.
Template Conservation																																																																					.
Template Sequence		V	K	D	T	L	I	Q	C	G	E	K	G	V	K	G	V	V	I	I	T	A	G	F	G	E	T	G	E	E	G	K	R	E	E	K	E	L	V	E	I	A	H	K	Y	G	X	R	I	I	G	P	N	C	V	G	I	X	N	T	H	V	D	L	N	A	T	F	.	I	T	V	A	K	K	G	N	V	A	F	I
Template Known Secondary structure													T										S	S	G	G	G																		T	T						S	S	S						G	G	G	T					S	.	S							S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	S	G	T	L	T	Y	E	A	V	K	Q	T	T	D	Y	G	F	G	Q	S	T	C	V	G	I	G	G	D	P	I	P	G	S	N	F	I	D	I	L	E	M	F	E	K	D	P	Q	T	E	A	I	V	M	I	G	E	I	G	G	S	A	E	E	E	A	A	A	Y	I	K	E	H	V	T	K	P	V	V
Query Conservation
Alig confidence																																			.	.
Template Conservation																																			.	.
Template Sequence		S	Q	S	G	A	L	G	A	G	I	V	Y	K	T	I	K	E	D	I	G	F	S	K	F	I	S	V	G	N	X	A	D	V	.	.	D	F	A	E	L	X	E	Y	L	A	D	T	E	E	D	K	A	I	A	L	Y	I	E	G	V	R	N	G	K	K	F	X	E	V	A	K	R	V	T	K	K	K	P	I	I
Template Known Secondary structure			S															T	T				S						T	T		S	S	S	.	.											T		S	S									S			S													T	T	T	S
Template Predicted Secondary structure																																			.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	I	A	G	V	T	A	P	K	G	K	R	M	G	H	A	G	A	I	I	A	G	G	K	G	T	A	D	E	K	F	A	A	L	E	A	A	G	V	K	T	V	R	S	L	A	D	I	G	E	A	L	K	T	V
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	K	A	G	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	E	A	A	F	K	Q	S	G	V	L	V	A	N	T	I	D	E	X	L	S	X	A	R	A	F
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T					S	S										G	G
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240																							.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions