Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGE9
Confidence95.60%DateThu Jan 5 11:28:55 GMT 2012
Rank201Aligned Residues103
% Identity17%Templatec1m67A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of leishmania mexicana gpdh complexed with inhibitor2 2-bromo-6-hydroxy-purine
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.. .......50.........60.........70.
Predicted Secondary structure 












.................














Query SS confidence 

































. . . . . . . . . . . . . . . . .




























Query Sequence  TKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPG. . . . . . . . . . . . . . . . . KGGTTHLGLPVFNTVREAVAATGATASVI
Query Conservation 
 
 


 


 
          
   
  
 
 .................  
  
 
   
 

 

      




Alig confidence 







.



















.



.................



















..






Template Conservation   

 



.
 

   
  

  
  
  .          
                  
    
      ..  
 

 
Template Sequence  NKAVVFGS. GAFGTALAMVLSKKCREVCV. WHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN. . GAEIILF
Template Known Secondary structure 

.STT.
S
TS
TTTSTT



TTS
T..T
SS
Template Predicted Secondary structure 

.



.




















..


Template SS confidence 















































































   16...20... ......30.........40... ......50.........60.........70.........80.... .....90.
 
   72.......80....... ..90.........100.........110.....
Predicted Secondary structure 

.......








Query SS confidence 















. . . . . . .



























Query Sequence  YVPAPFCKDSILEAID. . . . . . . AGIKLIITITEGIPTLDMLTVKVKLDEA
Query Conservation   


  
   
 
   ....... 


  

 
 

 
     
   
   
Alig confidence 















.......



























Template Conservation   
               
          

    

           
   
Template Sequence  VIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEF
Template Known Secondary structure 


T




S

TTT


TTT
Template Predicted Secondary structure 












Template SS confidence 


















































   92.......100.........110.........120.........130.........140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions