Job Description P0AFQ7 Confidence 99.42% Date Thu Jan 5 11:27:00 GMT 2012 Rank 47 Aligned Residues 253 % Identity 11% Template d2fvka2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain Resolution 2.40

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.												.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.																															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.																															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	D	S	H	C	H	L	D	G	L	D	Y	E	.	.	S	L	H	K	D	V	D	D	V	L	A	K	A	A	A	R	D	V	K	F	C	L	A	V	A	T	T	L	P	G	.	.	.	.	.	.	.	.	.	.	.	Y	L	H	M	R	D	L	V	G	E	R	D	N	V	V	F	S	C	G	V	H	P	L
Query Conservation																.	.																															.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	D	A	H	V	H	V	D	E	P	L	K	L	L	G	D	V	V	D	T	M	E	H	A	T	R	S	A	V	A	G	G	T	T	T	V	V	A	F	S	T	Q	D	V	S	K	K	G	P	S	A	L	A	E	S	V	K	L	D	V	D	E	Y	S	E	Q	T	L	Y	C	D	Y	G	L	H	L	I	L	F
Template Known Secondary structure							B					T	T		T	T	S			S													T	T												T	T			S	T	T														T	T	S			S	S
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	Q	N	D	P	Y	D	V	E	D	L	R	R	L	A	A	E	E	G	V	V	A	L	G	E	T	G	L	D	Y	Y	Y	T	P	E	T	K	V	R	Q	Q	E	S	F	I	H	H	I	Q	I	G	R	E	L	N	K	P	V	I	V	H	T	R	D	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	I	E	K	P	S	V	E	A	R	E	L	L	D	V	Q	L	Q	A	A	Y	N	D	Y	G	V	S	S	V	M	F	M	T	Y	P	G	L	Q	I	S	D	Y	D	I	M	S	A	M	Y	A	T	R	K	N	G	F	T	T	M	L	H	A	E	N	G	D	M	V	K	W	M	I	E	A	L	E	E	Q	G	L
Template Known Secondary structure					S	S																							B			B	S	S	S	T	T	T	B																T	T		B				B																	T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
																					136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	T	L	A	I	L	R	E	E	K	V	T	D	C	G	G	V	L	H	C	F	T	.	.	E	D	R	E	T	A	G	K	L	L	D	L	G	F	Y	I	S	F	S	G	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.								.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.
Template Sequence		T	D	A	Y	Y	H	G	V	S	R	P	S	I	V	E	G	E	A	T	N	R	A	I	T	L	A	T	T	M	D	T	P	.	.	.	I	L	F	V	H	V	S	S	P	Q	A	A	E	V	I	K	Q	A	Q	T	K	G	L	K	V	Y	A	E	T	C	P	Q	Y	A	L	L	S	D	A	I	T	R	C	H	G
Template Known Secondary structure			S	T	T					T	S																			T	T			.	.	.					S																	T																G	G	G	G	S
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250				.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
																																		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	R	N	A	E	Q	L	R	D	A	A	R	Y	V	P	L	D	R	L	L	V	E	T	D	S	P	Y	L	A	P	V	P	H	R	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.
Template Sequence		V	G	I	D	L	S	S	I	S	E	S	P	F	T	N	P	D	D	R	F	I	G	S	K	Y	I	C	S	P	P	I	R	P	E	G	T	Q	K	S	I	W	K	G	M	N	N	G	T	F	T	.	.	I	V	G	S	D	H	C	S	Y	N	Y	Y	E	K	T	S	T	A	S	K	H	R	A	F	D	P	E	N
Template Known Secondary structure			S			G	G	G	S	S	S	S	T	T	T		T	T		T	T	G	G	G	G	G			S	S					T	T	S											T	S		S	.	.						B				B	S	S			S	S	T	T	B	G	G	G	G			G	G	G
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.			.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
													216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	G	K	E	N	Q	P	A	M	V	R	D	V	A	E	Y	M	A	V	L	K	G	V	.	A	V	E	E	L	A	Q	V	T	T	D	N	F	A	R	L	F	H	I	D	A	S	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		N	K	N	G	E	F	R	Y	I	P	N	G	L	P	G	V	C	T	R	M	P	L	L	Y	D	Y	G	Y	L	R	G	N	L	T	S	M	M	K	L	V	E	I	Q	C	T	N	P	A	K	V	Y	G	M	Y	P	Q	K
Template Known Secondary structure		T			S		G	G	G	S				B			T	T	T									T	T	T	T	T	S	S	S										T							T	T		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions