Job Description P0AFQ7 Confidence 99.55% Date Thu Jan 5 11:27:00 GMT 2012 Rank 40 Aligned Residues 250 % Identity 16% Template d1ynya2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain Resolution 2.30

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		3	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure															.																										.	.	.	.	.	.
Query SS confidence															.																										.	.	.	.	.	.
Query Sequence		L	V	D	S	H	C	H	L	D	G	L	D	Y	.	E	S	L	H	K	D	V	D	D	V	L	A	K	A	A	A	R	D	V	K	F	C	L	A	V	.	.	.	.	.	.	A	T	T	L	P	G	Y	L	H	M	R	D	L	V	G	E	R	D	N	V	V	F	S	C	G	V	H	P	L	N	Q	N	D	P	Y
Query Conservation															.																										.	.	.	.	.	.
Alig confidence															.																										.	.	.	.	.	.																													.
Template Conservation																																																																											.
Template Sequence		G	I	D	P	H	T	H	L	D	M	P	F	G	G	T	V	T	A	D	D	F	F	T	G	T	R	A	A	A	F	G	G	T	T	S	I	V	D	F	C	L	T	K	K	G	E	S	L	K	S	A	I	A	T	W	H	E	K	A	R	G	K	A	V	I	D	Y	G	F	H	L	M	I	.	A	E	A	N	D	Q
Template Known Secondary structure									T	T				T	T				S													T	T												S	S															T	T	T		S	S									.	S
Template Predicted Secondary structure																																																																											.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																					.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	E	D	L	R	R	L	A	A	E	E	G	V	V	A	L	G	E	T	G	L	D	Y	Y	Y	T	P	E	T	K	V	R	Q	Q	.	E	S	F	I	H	H	I	Q	I	G	R	E	L	N	K	P	V	I	V	H	T	R	D	A	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																					.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.																			.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.
Template Sequence		V	L	E	E	L	E	S	V	I	S	S	E	.	.	.	.	.	G	I	T	S	L	K	V	F	M	A	Y	K	N	V	F	Q	A	D	D	E	T	L	F	K	T	L	V	K	A	K	E	L	G	A	L	V	Q	V	H	A	E	N	G	D	V	L	D	Y	L	T	K	K	A	L	A	E	G	N	T	D	P	I	Y
Template Known Secondary structure												T	S	.	.	.	.	.									S		S	T	T	T	T																		T								S															T	T			S	T	T
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
														137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																							.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																							.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	T	L	A	I	L	R	E	E	K	V	T	D	C	G	G	V	L	H	C	F	T	.	.	E	D	R	E	T	A	G	K	L	L	D	L	G	F	Y	I	S	F	S	G	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																							.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																							.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	A	Y	T	R	P	P	E	A	E	G	E	A	T	G	R	A	I	A	L	T	A	L	A	G	S	Q	L	Y	V	V	H	V	S	C	A	S	A	V	Q	R	I	A	E	A	R	E	K	G	W	N	V	Y	G	E	T	C	P	Q	Y	L	A	L	D	V	S	I	M	D	Q	P	D	F	E	G	A	K	Y	V	W
Template Known Secondary structure					T	S																				T							S			S													T	T																G	G	G	G			S	S	S	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
							181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.													.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure		.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	T	F	R	N	A	E	Q	L	R	D	A	A	R	Y	V	P	L	D	R	L	L	V	E	T	D	S	P	Y	L	A	P	V	P	H	.	.	.	.	.	.	.	.	.	.	.	.	R	G	K	E	N	Q	P	A	M	V	R	D	V	A	E	Y	M	A	V	L	K	G	V	A	V	E	E	L	A
Query Conservation		.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																			.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.
Template Sequence		S	P	P	L	R	E	K	W	N	Q	E	V	L	W	S	A	L	K	N	G	I	L	Q	.	.	T	V	G	S	D	H	C	P	F	N	F	R	G	Q	K	E	L	G	R	G	D	F	T	K	I	P	N	G	G	P	L	I	E	D	R	L	T	I	L	Y	S	E	G	V	R	Q	G	R	I	S	L	N	Q	F	V
Template Known Secondary structure		S	S					T	T											T	T	S	S		.	.						B					T	T	T	T	G	G	G	G	T	T		G	G	G	S				B			T	T	T									T	T	T	T	T	S	S
Template Predicted Secondary structure																									.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310			.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	T	T	D	N	F	A	R	L	F	H	I	D	A	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	S	S	T	K	A	A	K	L	F	G	M	F	P	R	K
Template Known Secondary structure					T							T	T		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions