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Job DescriptionP0AFQ7
Confidence99.53%DateThu Jan 5 11:27:00 GMT 2012
Rank41Aligned Residues252
% Identity15%Templated1gkra2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40 .........50.........60.........70.......
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Query Sequence  LVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAV. . . . . ATTLPGYLHMRDLVGERDNVVFSCGVHPLNQNDPYDV
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Template Sequence  VVDEHVHIIDMDLKNRYGRFELDSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLKVDFALYGGGVPGNLPEI
Template Known Secondary structure 


GGGTTTS

T
S
SSS
S
S
SSB



TT
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   56...60.........70.........80.........90.........100.........110.........120.........130.....
 
   78.80.........90.........100.........110.........120.........130....
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Query Sequence  EDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIGRELNKPVIVHTRDA. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RKMHD. . . . . . AGAVGFSMMAASVPGMFDAVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEA
Template Known Secondary structure  ......TT

B

BSS
SBTTTB
B

T
B


TT

S
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   136...140 .........150.........160.........170.........180.........190.........200.........
 
   135....140.........150........ .160.........170.........180 ....
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Query Sequence  . . . . . . . RADTLAILREEKVTDCGGVLHCFT. . EDRETAGKLLDLGFYISFSGIV. . . . . . . . . . . . . . . . . . . . . TFRN
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Template Sequence  SQPVFQENEAIQRALLLQKEAGCRLIVLHVSNPDGVELIHQAQSEGQDVHCESGPQYLNITTDDAERIGPYMKVAPPVRS
Template Known Secondary structure  S






STT


S

GGGGGGG

SS



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   211........220.........230.........240.........250.........260.........270.........280.........290
 
   185....190.........200 .........210.... .....220.........230.........240.........250..
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Query Sequence  AEQLRDAARYVPLDRL. LVETDSPYLAPVPH. . . . . . . . . . . RGKENQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFAR
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Template Sequence  AEMNIRLWEQLENGLIDTLGSDHGGHPVEDKEPGWKDVWKAGNGALGLETSLPMMLTNGVNKGRLSLERLVEVMCEKPAK
Template Known Secondary structure  T








GGGTGGGGT
GGGS


B

TTTTGGGTSS
T
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   291........300.........310.........320.........330.........340.........350.........360.........370
 
   253......260
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Query Sequence  LFHIDASR
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Template Sequence  LFGIYPQK
Template Known Secondary structure  T
TTT
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   371.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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