Job Description P0AFQ7 Confidence 97.51% Date Thu Jan 5 11:27:00 GMT 2012 Rank 135 Aligned Residues 162 % Identity 18% Template d1ejxc2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases alpha-subunit of urease, catalytic domain Resolution 1.60

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.														.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	S	H	C	H	L	D	G	L	D	Y	E	S	L	H	K	D	V	D	D	V	L	A	K	A	A	A	R	D	V	K	F	C	L	A	V	A	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	G	Y	L	H	M	R	D	L	V	G	E	R	D	N	V	V	F	S	C	G	V	H	P	L	N
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.																																																											.	.
Template Sequence		I	D	T	H	I	H	W	I	C	.	.	.	.	.	.	.	.	.	.	P	Q	Q	A	E	E	A	L	V	S	G	V	T	T	M	V	G	G	G	T	G	P	A	A	G	T	H	A	T	T	C	T	P	G	P	W	Y	I	S	R	M	L	Q	A	A	D	S	L	P	V	N	I	G	L	L	G	K	G	.	.	N
Template Known Secondary structure									S		.	.	.	.	.	.	.	.	.	.	T	T								T	T										S	S	S						S	S																T	T	S	S	S					B				.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																																																											.	.
Template SS confidence
		1131	.	.	.	.	.	.	.	.											1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.			.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.
Query Sequence		Q	N	D	P	Y	D	V	E	D	L	R	R	L	A	A	E	E	G	V	V	A	L	G	E	T	G	L	D	Y	Y	Y	T	P	E	T	K	V	R	Q	Q	E	S	F	I	H	H	I	Q	I	G	R	E	L	N	K	P	V	I	V	H	T	.	.	.	.	.	R	D	A	R	A	D	T	L	A	I	L	R	E	E
Query Conservation																																																															.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.						.										.	.	.																						.	.	.	.	.												.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.						.										.	.	.																																						.	.	.
Template Sequence		V	S	Q	P	D	A	L	R	E	Q	V	A	A	.	.	.	.	.	.	.	.	.	G	V	I	G	L	.	I	H	E	D	W	G	A	T	P	.	.	.	A	A	I	D	C	A	L	T	V	A	D	E	M	D	I	Q	V	A	L	H	S	D	T	L	N	E	S	G	F	V	E	D	T	L	A	A	I	.	.	.
Template Known Secondary structure			S	S											.	.	.	.	.	.	.	.	.	T		S	B		.		B	G	G	G					.	.	.														T		B				B			T	T		S	S											.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.						.										.	.	.																																						.	.	.
Template SS confidence
		1199	1200	.	.	.	.	.	.	.	.	.	1210	.										.	.	.	.	.		.	.	.	1220	.	.	.	.	.				.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.
		146	.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		K	V	T	D	C	G	G	V	L	H	C	.	.	.	.	.	F	T	E	D	R	E	T	A	G	K	L	L	D	L	G	F	Y	I	S	F	S	G	I	V	T	F	R	N	A	E	Q	L	R	D	A	A	R	Y	V
Query Conservation													.	.	.	.	.
Alig confidence		.	.										.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	G	G	R	T	I	H	T	F	H	T	E	G	A	G	G	G	H	A	P	D	I	I	T	A	C	A	H	P	N	I	L	P	S	S	T	N	P	T	L	P	Y	T	L	N	T	I	D	E	H	L	D	M	L
Template Known Secondary structure		.	.	T	T						S	S	T	T	S	T	T	S	S	S	T	T	T	G	G	G	G	G	G		T	T							S	T	T	S	S		B	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				1264	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions