Phyre 2 alignment of P0AFQ7 with c3rhgA

Job Description P0AFQ7
Confidence 99.82% Date Thu Jan 5 11:27:00 GMT 2012

Rank 33 Aligned Residues 262

% Identity 17% Template c3rhgA_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative phophotriesterase; PDBTitle: crystal structure of amidohydrolase pmi1525 (target efi-500319) from2 proteus mirabilis hi4320

Resolution 1.53 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20																																								.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	M	F	L	V	D	S	H	C	H	L	D	G	L	D	Y	E	S	L	H	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	D	D	V	L	A	K	A	A	A	R	D	V	K	F	C	L	A	V	A
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	M	G	L	T	L	P	H	E	H	L	F	N	D	L	S	G	V	V	D	E	P	F	Y	E	F	S	H	V	L	V	D	K	K	V	S	A	D	I	Q	W	G	L	K	Y	D	P	Y	C	C	C	D	N	M	D	K	K	P	I	E	D	V	I	F	E	L	N	N	F	K	E	L	G	G	K	T	I	V	D	A	T
Template Known Secondary structure										S	S				G	G	G						S	T	T	G	G	G	G	T	T	S				G	G	G					T	T		G	G	G						S																	T	T
Template Predicted Secondary structure
Template SS confidence
	17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

		42	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70						.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure	.						.																									.	.	.	.	.																													.	.	.	.	.	.
Query SS confidence	.						.																									.	.	.	.	.																													.	.	.	.	.	.
Query Sequence	.	T	T	L	P	G	.	Y	L	H	M	R	D	L	V	G	E	R	D	N	V	V	F	S	C	G	V	H	P	L	N	.	.	.	.	.	Q	N	D	P	Y	D	V	E	D	L	R	R	L	A	A	E	E	G	V	V	A	L	G	E	T	G	L	D	.	.	.	.	.	.	Y	Y	Y	T	P	E	T	K	V	R
Query Conservation	.						.																									.	.	.	.	.																													.	.	.	.	.	.
Alig confidence	.						.																									.	.	.	.	.																													.	.	.	.	.	.
Template Conservation
Template Sequence	G	S	S	S	I	G	R	D	I	R	K	L	K	Q	V	A	E	L	T	G	I	N	V	V	A	S	S	G	L	Y	I	E	K	F	E	G	K	R	L	A	D	D	I	D	A	M	A	K	M	I	D	D	E	L	N	I	G	I	D	G	T	D	I	R	A	G	M	I	G	E	I	G	V	S	P	F	F	T	D	G
Template Known Secondary structure		S	G	G	G	T																														G	G	G	G	G	S															T		S	T	T	S	S													T	T
Template Predicted Secondary structure
Template SS confidence
	97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

	109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																	.								.	.	.	.																												.	.	.
Query SS confidence																	.								.	.	.	.																												.	.	.
Query Sequence	Q	Q	E	S	F	I	H	H	I	Q	I	G	R	E	L	N	.	K	P	V	I	V	H	T	.	.	.	.	R	D	A	R	A	D	T	L	A	I	L	R	E	E	K	V	T	D	C	G	G	V	L	H	C	F	T	.	.	.	E	D	R	E	T	A	G	K	L	L	D	L	G	F	Y	I	S	F	S	G	I	V
Query Conservation																	.								.	.	.	.																												.	.	.
Alig confidence																	.								.	.	.	.																												.	.	.
Template Conservation
Template Sequence	E	K	N	S	L	R	A	A	A	L	A	Q	N	N	N	P	Y	A	S	M	N	I	H	M	P	G	W	Q	R	R	G	D	E	V	L	D	I	L	L	T	E	M	G	C	D	P	A	K	I	S	L	A	H	S	D	P	S	G	K	D	I	D	Y	Q	C	K	M	L	D	R	G	V	W	L	E	F	D	M	I	G
Template Known Secondary structure													T	T		T	T									T	T	S											T	T	T	T				G	G	G				S			G	G	G	T	T											T	T								T	T
Template Predicted Secondary structure
Template SS confidence
	177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

	181	.	.	.														.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	T	F	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	Q	L	R	D	A	A	R	Y	V	P	L	D	R	L	L	V	E	T	D	S	P	Y	L	A	P	V	P	H	R	G	K	E	N	Q	P	A	M	V	R	D	V	A	E	Y	M	A	V	L	K	G	V	A	V	E	E	L	A	Q	V	T	T
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.
Template Conservation																																																																				.
Template Sequence	L	D	I	S	F	P	K	E	G	A	A	P	S	V	M	D	T	V	E	A	V	A	T	L	I	E	R	G	Y	G	N	Q	I	V	L	S	H	D	V	F	L	K	Q	M	W	A	K	N	G	G	N	G	W	G	F	V	P	N	V	F	L	S	L	L	A	Q	R	.	G	I	D	K	T	I	I	D	K	L	C	I
Template Known Secondary structure				B		S	S	S		B																	T	T		G	G	G									S	G	G	G	S	G	G	G	T	S		T	T	T					T								T	.	T										T	T
Template Predicted Secondary structure																																																																				.
Template SS confidence
	257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.

	248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	D	N	F	A	R	L	F	H	I	D	A	S	R	L	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence	D	N	P	A	N	L	L	A	A	E	N	L	Y	F	Q	S
Template Known Secondary structure									S			S	S
Template Predicted Secondary structure
Template SS confidence
	336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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