Job Description P0AFQ7 Confidence 99.62% Date Thu Jan 5 11:27:00 GMT 2012 Rank 37 Aligned Residues 244 % Identity 16% Template c3pnuA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dihydroorotase; PDBTitle: 2.4 angstrom crystal structure of dihydroorotase (pyrc) from2 campylobacter jejuni. Resolution 2.40 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.								.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.
Query Sequence		V	D	S	H	C	H	L	D	G	L	D	Y	E	S	L	H	K	D	V	D	D	V	L	A	K	A	A	A	R	D	V	K	F	C	L	A	V	A	T	T	.	.	.	.	.	.	.	L	P	G	Y	L	H	M	R	D	L	V	G	E	R	D	N	V	V	F	S	C	G	V	H	P	L	N	Q	N	D	P	Y	D
Query Conservation																																										.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.																									.	.	.	.	.	.	.																																.	.
Template Conservation											.	.	.	.	.	.	.																																																															.	.
Template Sequence		L	D	M	H	L	H	L	R	D	.	.	.	.	.	.	.	N	Q	M	L	E	L	I	A	P	L	S	A	R	D	F	C	A	A	V	I	M	P	N	L	I	P	P	L	C	N	L	E	D	L	K	A	Y	K	M	R	I	L	K	A	C	K	D	E	N	F	T	P	L	M	T	L	F	F	K	N	Y	D	.	.
Template Known Secondary structure										S	.	.	.	.	.	.	.													T	T		S									S	S				S																T	T	S							B				S				.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.																																																															.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.								.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.
Query Sequence		V	E	D	L	R	R	L	A	A	E	E	G	V	V	A	L	G	E	T	G	L	D	Y	Y	Y	T	P	E	T	K	V	R	Q	Q	E	S	F	I	H	H	I	Q	I	G	R	E	L	N	K	P	V	I	V	H	T	.	.	.	.	.	.	.	.	R	D	A	R	A	D	T	L	A	I	L	R	E	E	K	V	T
Query Conservation																																																									.	.	.	.	.	.	.	.
Alig confidence		.																																																							.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	E	K	F	L	Y	S	A	K	D	E	I	F	G	I	L	Y	P	A	G	I	T	T	N	S	N	G	G	V	S	S	F	D	I	E	Y	L	K	P	T	L	E	A	M	S	D	L	N	I	P	L	L	V	H	G	E	T	N	D	F	V	M	D	R	E	S	N	F	A	K	I	Y	E	K	L	A	K	H	F	P
Template Known Secondary structure		.								T	T	T		S	B				B	T	T	S	S	S	S		T	T	S	B																		T	T										S	S		G	G	G	T	T	G	G	G												T
Template Predicted Secondary structure		.
Template SS confidence
			78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.																									.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	C	G	G	V	L	H	C	F	T	E	D	R	E	T	A	G	K	L	L	D	L	G	F	Y	I	S	F	S	G	I	V	T	F	R	N	A	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	D	A	A	R	Y	V	P	L	D	R	L	L	V	E	T
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																																																														.
Template Sequence		R	L	K	I	V	M	E	H	I	T	T	K	T	L	C	E	L	L	K	D	Y	E	N	L	Y	A	T	I	T	L	H	H	L	I	I	T	L	D	D	V	I	G	G	K	M	N	P	H	L	F	C	K	P	I	A	K	R	Y	E	D	K	E	A	L	C	E	L	A	F	S	G	Y	E	K	V	M	.	F	G	S
Template Known Secondary structure		T	S						S			S											T	T							S	G	G	G	T								T	S	S			G	G	G			S	S																	T	T		T	T			.
Template Predicted Secondary structure																																																																														.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	P	Y	L	A	P	V	P	H	R	G	K	E	N	Q	P	A	M	V	R	D	V	A	E	Y	M	A	V	L	K	G	V	A	V	E	E	L	A	Q	V	T	T	D	N	F	A	R	L	F	H	I	D	A	S	R
Query Conservation
Alig confidence																															.	.
Template Conservation																															.	.
Template Sequence		D	S	A	P	H	P	K	G	C	A	A	G	V	F	S	A	P	V	I	L	P	V	L	A	E	L	F	K	Q	.	.	N	S	S	E	E	N	L	Q	K	F	L	S	D	N	T	C	K	I	Y	D	L	K	F	K	E
Template Known Secondary structure			B				B					S		B			G	G	G												.	.		S										T								T				S	S
Template Predicted Secondary structure																															.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions