Job Description P0AFQ7 Confidence 97.80% Date Thu Jan 5 11:27:00 GMT 2012 Rank 130 Aligned Residues 140 % Identity 19% Template c3ooqC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:amidohydrolase; PDBTitle: crystal structure of amidohydrolase from thermotoga maritima msb8 Resolution 2.06 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.									.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.
Query Sequence		S	F	I	H	H	I	Q	I	G	R	E	L	N	K	P	V	I	V	H	T	R	D	A	R	A	D	T	L	A	I	L	R	E	E	K	V	T	D	C	G	G	V	L	H	C	F	T	E	D	R	E	T	A	G	K	L	L	D	L	G	F	Y	I	S	F	S	G	I	V	T	F	.	.	.	.	.	.	.	.	R
Query Conservation																																																																									.	.	.	.	.	.	.	.
Alig confidence																									.																																																.	.	.	.	.	.	.	.
Template Conservation																									.
Template Sequence		L	K	X	E	V	G	E	X	V	L	R	K	K	I	P	A	R	X	H	A	H	R	A	.	D	D	I	L	T	A	I	R	I	A	E	E	F	G	F	N	L	V	I	E	H	G	T	E	A	Y	K	I	S	K	V	L	A	E	K	K	I	P	V	V	V	G	P	L	L	T	F	R	T	K	L	E	L	K	D	L
Template Known Secondary structure												T	T	S	S								S		.														T									T	T	G	G	G	G							T	T									S	S				S	G	G	G	T	T
Template Predicted Secondary structure																									.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.			.	260	.
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		N	A	E	Q	L	R	D	A	A	R	Y	V	P	L	D	R	L	L	V	E	T	D	S	P	Y	L	A	P	V	P	H	R	G	K	E	N	Q	P	A	M	V	R	D	V	A	E	Y	M	A	V	L	K	G	V	A	V	E	E	L	A	Q	V	T	T	D	N	F	A	R	L	F	H	I	D	A	.	.	S	R	L
Query Conservation																																																																													.	.
Alig confidence															.	.													.	.	.	.	.	.	.	.	.	.	.																																						.	.
Template Conservation															.	.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	X	E	T	I	A	K	L	L	K	D	G	V	.	.	L	I	A	L	X	C	D	H	P	V	I	P	.	.	.	.	.	.	.	.	.	.	.	L	E	F	A	T	V	Q	A	A	T	A	X	R	Y	G	A	K	E	E	D	L	L	K	I	L	T	V	N	P	A	K	I	L	G	L	E	D	R	I	G	S	I
Template Known Secondary structure			T	T								T	T		.	.							T	T	T	T	S		.	.	.	.	.	.	.	.	.	.	.	G	G	G								G	G	G	G	T									T	T	T							T	T		T	T	T	S	S	S
Template Predicted Secondary structure															.	.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.												.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		262	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	P	G	K
Template Known Secondary structure			T	T	S
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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