Job Description P0AFQ7 Confidence 99.96% Date Thu Jan 5 11:27:00 GMT 2012 Rank 23 Aligned Residues 234 % Identity 19% Template c3nurA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amidohydrolase; PDBTitle: crystal structure of a putative amidohydrolase from staphylococcus2 aureus Resolution 1.75 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.						.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	L	V	D	S	H	C	H	L	D	G	L	D	Y	E	.	.	.	.	.	S	L	H	K	D	V	D	D	V	L	A	K	A	A	A	R	D	V	K	F	C	L	A	V	A	T	T	L	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	H	M	R	D	L	V	G	E	R	D	N	V	V
Query Conservation																	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	S	I	T	F	E	E	H	Y	V	I	E	D	I	Q	K	E	T	N	A	D	E	L	S	H	H	D	E	R	I	Q	F	X	N	N	Q	D	V	Q	I	Q	V	L	S	Y	G	N	G	S	P	S	N	L	V	G	Q	K	A	I	E	L	C	Q	K	A	N	D	Q	L	A	N	Y	I	A	Q	Y	P	N	R	F
Template Known Secondary structure											B										T	T	B	T	T												T	T										T	T		G	G	G	S																							S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		F	S	C	G	V	H	P	L	N	Q	N	D	P	Y	D	V	E	D	L	R	R	L	A	A	E	E	G	V	V	A	L	G	E	T	G	L	D	Y	Y	Y	T	P	E	T	K	V	R	Q	Q	E	S	F	I	H	H	I	Q	I	G	R	E	L	N	K	P	V	I	V	H	T	R	D	A	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.																																														.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.
Template Sequence		V	G	F	A	T	L	P	I	N	E	P	E	A	A	A	R	E	F	E	R	C	I	.	.	.	.	.	.	N	D	L	G	F	K	G	A	L	I	X	G	R	A	Q	D	G	F	L	D	Q	D	K	Y	D	I	I	F	K	T	A	E	N	L	D	V	P	I	Y	L	H	P	A	P	V	N	S	D	I	Y	Q	S
Template Known Secondary structure					B				T	T	S													.	.	.	.	.	.		T	T									S		B	T	T	B		T	T	S	G	G	G											T
Template Predicted Secondary structure																								.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.							.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
																															135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.						170	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.										.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.										.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	D	T	L	A	I	L	R	E	E	K	V	T	D	C	G	G	V	L	H	C	F	T	E	D	R	E	T	A	G	K	L	L	D	.	.	.	.	.	L	G	F	Y	I	S	F	S	G	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.										.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																								.	.	.	.	.										.	.
Template Conservation																																										.
Template Sequence		Y	Y	K	G	N	Y	P	E	V	T	A	A	T	F	A	C	F	G	Y	G	W	H	I	D	V	G	I	H	A	I	H	L	V	L	S	G	I	F	D	R	.	Y	P	K	L	N	X	I	I	G	H	W	G	E	F	I	P	F	F	L	E	R	X	D	E	A	L	F	A	E	H	L	N	H	S	V	S	Y	Y	F
Template Known Secondary structure			T			S	S										T	T	T	T																T	T					.	S	T	T							G	G	G	T	T	G	G	G	G								S			T	T	S	S	S
Template Predicted Secondary structure																																										.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
									179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	I	V	T	F	R	N	A	E	Q	L	R	D	A	A	R	Y	V	P	L	D	R	L	L	V	E	T	D	S	P	Y	L	A	P	V	P	H	R	G	K	E	N	Q	P	A	M	V	R	D	V	A	E	Y	M	A	V	L	K	G	V	A	V	E	E	L	A	Q	V	T	T	D	N	F	A
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	N	S	F	Y	I	T	P	S	G	X	L	T	K	P	Q	F	D	L	V	K	K	E	V	G	I	D	R	I	L	Y	A	A	D	Y	P	Y	I	E	P	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	V	F	L	D	E	L	G	L	T	D	E	E	K	E	K	I	S	Y	T	N	G	A
Template Known Secondary structure				S						T	T																G	G	G	B		B				T	T	T				T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S	S												T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.															.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		252	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	F	H	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	L	G	L
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions