Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFQ7
Confidence99.50%DateThu Jan 5 11:27:00 GMT 2012
Rank42Aligned Residues246
% Identity16%Templatec3nqbB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:adenine deaminase 2; PDBTitle: crystal structure of adenine deaminase from agrobacterium tumefaciens2 (str. c 58)
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40. ........50.........60..... ....70....
Predicted Secondary structure 














......





..






Query SS confidence 






































. . . . . .























. .








Query Sequence  LVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVA. . . . . . TTLPGYLHMRDLVGERDNVVFSCG. . VHPLNQNDP
Query Conservation 


 
 
           
    
      

   
   ......                        ..  
      
Alig confidence 







.....

























......























..








Template Conservation 


 
 

.....  
           
  
 



        
 
  
                   

 

     
Template Sequence  LIDTHXHI. . . . . ESSXITPAAYAAAVVARGVTTIVWDPHEFGNVHGVDGVRWAAKAIENLPLRAILLAPSCVPSAPGLE
Template Known Secondary structure 
G.....GGGTS
TTT

TTT
SS


SSSSTTS
Template Predicted Secondary structure 




.....









































Template SS confidence 















































































   88.90..... ....100.........110.........120.........130.........140.........150.........160..
 
   75....80.........90.........100.........110.........120.........130.........140.........150....
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  YDVEDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILREEKVTDCGGVL
Query Conservation       
               
                       
     

 

           
     
   

 
Alig confidence 







































































.....


Template Conservation            
           
 
                 
  
   
  
 


       
      
.....
  
Template Sequence  RGGADFDAAILADLLSWPEIGGIAEIXNXRGVIERDPRXSGIVQAGLAAEKLVCGHARGLKNADLNAFXAAG. . . . . VSS
Template Known Secondary structure 

S



TSTT

TT
T


TT

TT.....

Template Predicted Secondary structure 



































.....
Template SS confidence 















































































   163......170.........180.........190.........200.........210.........220.........230.... ...
 
   155....160.........170.........180.........190....... ..200.........210.........220.........230...
Predicted Secondary structure 


















.


















Query SS confidence 










































.



































Query Sequence  HCFTEDRETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPL. DRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAV
Query Conservation   
                                         .







 
                
      
  
Alig confidence 










































.



















......









Template Conservation   
     

       
  
 
              
      
  
 
 


         
 ......
   

 

 
Template Sequence  DHELVSGEDLXAKLRAGLTIELRGSHDHLLPEFVAALNTLGHLPQTVTLCTDDVFPDDLLQGGG. . . . . . LDDVVRRLVR
Template Known Secondary structure 



ST
SSSGGGTS

TT
B



S......
Template Predicted Secondary structure 























......
Template SS confidence 















































































   238.240.........250.........260.........270.........280.........290.........300. ........310.
 
   234.....240.........250........ .260.....
Predicted Secondary structure 






.



Query SS confidence 
























.






Query Sequence  LKGVAVEELAQVTTDNFARLFHIDA. SRLQSIR
Query Conservation    

  
    
   

 

  
  .       
Alig confidence 
.






















.






Template Conservation   .


  


  

 


  


 
 


 


Template Sequence  Y. GLKPEWALRAATLNAAQRLGRSDLGLIAAGR
Template Known Secondary structure  T.T

TTT
TTSSS

TTS
Template Predicted Secondary structure 
.














Template SS confidence 
































   312 .......320.........330.........340...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions