Job Description P0AFQ7 Confidence 99.85% Date Thu Jan 5 11:27:00 GMT 2012 Rank 32 Aligned Residues 257 % Identity 16% Template c3k2gA_ PDB info PDB header:resiniferatoxin binding protein Chain: A: PDB Molecule:resiniferatoxin-binding, phosphotriesterase- PDBTitle: crystal structure of a resiniferatoxin-binding protein from2 rhodobacter sphaeroides Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.																																								.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		M	F	L	V	D	S	H	C	H	L	D	G	L	D	Y	E	S	L	H	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	D	V	L	A	K	A	A	A	R	D	V	K	F	C	L	A	V	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		L	G	H	T	L	X	H	E	H	L	Q	N	D	C	R	C	W	W	N	P	P	Q	E	P	E	R	Q	Y	L	A	E	A	P	I	S	I	E	I	L	S	E	L	R	Q	D	P	F	V	N	K	H	N	I	A	L	D	D	L	D	L	A	I	A	E	V	K	Q	F	A	A	V	G	G	R	S	I	V	D	P	T
Template Known Secondary structure				S			S	S			S	S				G	G	G						S	G	G	G	T					S				G	G	G						T		G	G	G		T	T	T	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
						41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.							100	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																				.	.																									.	.	.	.	.	.
Query SS confidence		.	.	.	.																																				.	.																									.	.	.	.	.	.
Query Sequence		.	.	.	.	A	T	T	L	P	G	Y	L	H	M	R	D	L	V	G	E	R	D	N	V	V	F	S	C	G	V	H	P	L	N	Q	N	D	P	Y	.	.	D	V	E	D	L	R	R	L	A	A	E	E	G	V	V	A	L	G	E	T	G	L	D	Y	.	.	.	.	.	.	Y	Y	T	P	E	T	K	V	R
Query Conservation		.	.	.	.																																				.	.																									.	.	.	.	.	.
Alig confidence		.	.	.	.																																				.	.																									.	.	.	.	.	.
Template Conservation
Template Sequence		C	R	G	I	G	R	D	P	V	K	L	R	R	I	S	A	E	T	G	V	Q	V	V	X	G	A	G	Y	Y	L	A	S	S	X	P	E	T	A	A	R	L	S	A	D	D	I	A	D	E	I	V	A	E	A	L	E	G	T	D	G	T	D	A	R	I	G	L	I	G	E	I	G	V	S	S	D	F	T	A	E
Template Known Secondary structure			B	T	T	T																						S	B			G	G	G			G	G	G	G	T																T		B	T	T	B	S				S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																										.	.	.																												.	.	.																						.	.
Query SS confidence																										.	.	.																												.	.	.																						.	.
Query Sequence		Q	Q	E	S	F	I	H	H	I	Q	I	G	R	E	L	N	K	P	V	I	V	H	T	R	.	.	.	D	A	R	A	D	T	L	A	I	L	R	E	E	K	V	T	D	C	G	G	V	L	H	C	F	T	E	.	.	.	D	R	E	T	A	G	K	L	L	D	L	G	F	Y	I	S	F	S	G	I	V	.	.
Query Conservation																										.	.	.																												.	.	.																						.	.
Alig confidence																										.	.	.																												.	.	.																						.	.
Template Conservation
Template Sequence		E	E	K	S	L	R	G	A	A	R	A	Q	V	R	T	G	L	P	L	X	V	H	L	P	G	W	F	R	L	A	H	R	V	L	D	L	V	E	E	E	G	A	D	L	R	H	T	V	L	C	H	X	N	P	S	H	X	D	P	V	Y	Q	A	T	L	A	Q	R	G	A	F	L	E	F	D	X	I	G	X	D
Template Known Secondary structure																										T	T	S													T	T			G	G	G							G	G	G	T	T												T								T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
														181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	T	F	R	N	A	E	Q	L	R	D	A	A	R	Y	V	P	L	D	R	L	L	V	E	T	D	S	P	Y	L	A	P	V	P	H	R	G	K	E	N	Q	P	A	M	V	R	D	V	A	E	Y	M	A	V	L	K	G	V	A	V	E	E	L	A	Q	V	T	T	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																						.
Template Conservation																																																																			.
Template Sequence		F	F	Y	A	D	Q	G	V	Q	C	P	S	D	D	E	V	A	R	A	I	L	G	L	A	D	H	G	Y	L	D	R	I	L	L	S	H	D	V	F	V	K	X	X	L	T	R	Y	G	G	N	G	Y	A	F	V	T	K	H	F	L	P	R	L	R	R	.	H	G	L	D	D	A	A	L	E	T	L	X	V	T
Template Known Secondary structure					T	T	T	T																			T	T		G	G	G									S	G	G	G	S	G	G	G	T	S		T	T	S													.	T	T											T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.
		249	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	A	R	L	F	H	I	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	P	R	R	V	F	D	A	S	I
Template Known Secondary structure									T	T	S
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions