Job Description P0AFQ7 Confidence 99.97% Date Thu Jan 5 11:27:00 GMT 2012 Rank 15 Aligned Residues 237 % Identity 17% Template c3ij6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:uncharacterized metal-dependent hydrolase; PDBTitle: crystal structure of an uncharacterized metal-dependent2 hydrolase from lactobacillus acidophilus Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.																				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	F	L	V	D	S	H	C	H	L	D	G	L	D	Y	E	S	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	V	D	D	V	L	A	K	A	A	A	R	D	V	K	F	C	L	A	V	A	T	T	L	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	K	I	D	A	Y	A	H	I	L	P	A	K	Y	Y	Q	K	M	L	S	V	E	P	N	I	P	N	M	F	P	F	I	K	I	K	T	L	M	D	L	D	E	R	L	T	K	W	P	D	Q	N	T	K	Q	V	I	S	L	A	N	I	S	P	E	D	F	T	D	S	K	T	S	A	E	L	C	Q	S	A
Template Known Secondary structure																									T	T						G	G	G	G													T		S		T	T									S			G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	H	M	R	D	L	V	G	E	R	D	N	V	V	F	S	C	G	V	H	P	L	N	Q	N	D	P	Y	D	V	E	D	L	R	R	L	A	A	E	E	G	V	V	A	L	G	E	T	G	L	D	Y	Y	Y	T	P	E	T	K	V	R	Q	Q	E	S	F	I	H	H	I	Q	I	G	R	E	L	N	K	P
Query Conservation
Alig confidence																																									.	.	.	.	.
Template Conservation																																									.	.	.	.	.
Template Sequence		N	E	E	L	S	N	L	V	D	Q	H	P	G	K	F	A	G	A	V	A	I	L	P	M	N	N	I	E	S	A	C	K	V	I	S	S	I	K	D	.	.	.	.	.	D	E	N	L	V	G	A	Q	I	F	T	R	H	L	G	K	S	I	A	D	K	E	F	R	P	V	L	A	Q	A	A	K	L	H	V	P
Template Known Secondary structure													T	T	T										T	T															.	.	.	.	.		T	T								S			T	T			T	T	S	T	T	T										T	T
Template Predicted Secondary structure																																									.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120						.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		127	.	.	130	.	.	.	.																					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160												.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	V	H	T	R	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	D	T	L	A	I	L	R	E	E	K	V	T	D	C	G	G	V	L	H	C	F	T	E	D	.	.	.	.	.	.	.	.	.	.	.	R	E	T	A	G	K	L	L	D	L	G	F	Y	I	S
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.
Template Sequence		L	W	M	H	P	V	F	D	A	R	K	P	D	N	N	L	V	F	S	W	E	Y	E	L	S	Q	A	M	L	Q	L	V	Q	S	D	L	F	Q	D	.	Y	P	N	L	K	I	L	V	H	H	A	G	A	M	V	P	F	F	S	G	R	I	D	H	I	L	D	E	K	H	A	Q	D	F	K	K	F	Y	V	D
Template Known Secondary structure										T	T	S	S	S			T	T	T																T	T					.		T	T						S	G	G	G	T	T	T	T	T	S								S								G	G	G
Template Predicted Secondary structure																																									.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	G	I	V	T	F	R	N	A	E	Q	L	R	D	A	A	R	Y	V	P	L	D	R	L	L	V	E	T	D	S	P	Y	L	A	P	V	P	H	R	G	K	E	N	Q	P	A	M	V	R	D	V	A	E	Y	M	A	V	L	K	G	V	A	V	E	E	L	A	Q	V	T	T	D	N	F	A	R	L	F	H
Query Conservation
Alig confidence					.	.	.																																.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.																																.	.	.	.	.	.	.	.	.
Template Sequence		T	A	I	.	.	.	L	G	N	T	P	A	L	Q	L	A	I	D	Y	Y	G	I	D	H	V	L	F	G	T	D	A	P	F	A	V	M	P	.	.	.	.	.	.	.	.	.	S	G	A	D	Q	I	I	T	Q	A	I	N	D	L	T	I	S	D	K	D	K	Q	K	I	F	H	D	N	Y	Y	S	L	I	K
Template Known Secondary structure				S	.	.	.	S	S														G	G	G							B	T	S	S	S	T	T	.	.	.	.	.	.	.	.	.	T		S										T	S	S	S										T
Template Predicted Secondary structure					.	.	.																																.	.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.				.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.										270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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