Job Description P0AFQ7 Confidence 99.16% Date Thu Jan 5 11:27:00 GMT 2012 Rank 65 Aligned Residues 259 % Identity 11% Template c3hpaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:amidohydrolase; PDBTitle: crystal structure of an amidohydrolase gi:44264246 from an2 evironmental sample of sargasso sea Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.																												.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	D	S	H	C	H	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	D	Y	E	S	L	H	K	D	V	D	D	V	L	A	K	A	A	A	R	D	V	K	F	C	L	A	V	A	T	T	L	P	G	Y	L	H	M	R	D	L	V	G
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	N	T	H	H	H	M	Y	Q	S	L	T	R	A	V	P	A	A	Q	N	A	E	L	F	G	W	L	T	N	L	Y	K	I	W	A	H	L	T	P	E	M	I	E	V	S	T	L	T	A	M	A	E	L	L	Q	S	G	C	T	T	S	S	D	H	L	Y	I	Y	P	N	G	S	R	L	D	D	S	I	G
Template Known Secondary structure									G	G	G	G	G	S		S						T															T	T																			T	T	T								B					T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	D	N	V	V	F	S	C	G	V	H	P	L	N	Q	N	D	P	Y	D	V	E	D	L	R	R	L	A	A	E	E	G	V	V	A	L	G	E	T	G	L	D	Y	Y	Y	T	P	E	T	K	V	R	Q	Q	E	S	F	I	H	H	I	Q	I	G	R	E	L	N	K	P	V	I	V	H	T	R	D	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	Q	R	I	G	M	R	F	H	A	S	R	G	A	M	S	E	P	D	I	L	R	D	T	Q	R	L	I	E	T	Y	H	D	E	G	R	Y	A	M	L	R	V	V	V	A	P	C	S	P	F	S	V	S	R	D	L	M	R	D	A	A	V	L	A	R	E	Y	G	V	S	L	H	T	H	L	A	E	N	V
Template Known Secondary structure							T																														S	T	T		S								S		T	T	T	S																T								S		S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		136	.					.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.																		.																											.	.	.
Query SS confidence				.	.	.	.																		.																											.	.	.
Query Sequence		A	D	.	.	.	.	T	L	A	I	L	R	E	E	K	V	T	D	C	G	G	V	L	.	H	C	F	T	E	D	R	E	T	A	G	K	L	L	D	L	G	F	Y	I	S	F	S	G	I	V	.	.	.	T	F	R	N	A	E	Q	L	R	D	A	A	R	Y	V	P	L	D	R	L	L	V	E	T	D	S	P
Query Conservation				.	.	.	.																		.																											.	.	.
Alig confidence				.	.	.	.																		.																											.	.	.																	.	.
Template Conservation																																																																							.	.
Template Sequence		N	D	I	A	Y	T	P	A	E	Y	A	E	D	L	G	W	V	G	H	D	V	W	H	A	H	C	V	Q	L	D	D	A	G	I	G	L	F	A	R	T	G	T	G	V	A	H	C	P	C	S	N	M	R	L	A	S	G	I	A	P	V	K	K	M	R	L	A	G	V	.	.	P	V	G	L	G	V	D	G	S
Template Known Secondary structure					T									T	T	T			S	T	T							T	T													T													T	T													T		.	.									T
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		Y	L	A	P	V	P	H	R	G	K	E	N	Q	P	A	M	V	R	D	V	A	E	Y	M	A	V	L	K	G	V	A	V	E	E	L	A	Q	V	T	T	D	N	F	A	R	L	F	H	I	D	A	.	S	R	L	Q	S	I	R
Query Conservation																																																					.
Alig confidence								.	.																																												.
Template Conservation								.	.
Template Sequence		A	S	N	D	G	A	.	.	Q	M	V	A	E	V	R	Q	A	L	L	L	Q	R	V	G	F	G	P	D	A	M	T	A	R	E	A	L	E	I	A	T	L	G	G	A	K	V	L	N	R	D	D	I	G	A	L	K	P	G	M
Template Known Secondary structure		T	S	S				.	.																			T	T	S	S										T								T		S	S	S	S	S		S	T	T	S
Template Predicted Secondary structure								.	.
Template SS confidence
		350	.	.	.	.	.			.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions