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Job DescriptionP0AFQ7
Confidence98.72%DateThu Jan 5 11:27:00 GMT 2012
Rank102Aligned Residues248
% Identity22%Templatec3etkA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:uncharacterized metal-dependent hydrolase; PDBTitle: crystal structure of an uncharacterized metal-dependent2 hydrolase from pyrococcus furiosus
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.
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Query Sequence  LVDSHCHLDGLDYESLHKD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  FFDSHLHLDELGMSLEMVDLRGVKSMEELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRPVFLYRRCFHVAVMN
Template Known Secondary structure 
TS
TT

ST

SSS
TS


TTSSS
TTSS
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   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   22.......30.........40.........50....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VDDVLAKAAARDVKFCLAVATTLPGYLHMRDLV
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Template Conservation         
                                                                        
Template Sequence  SKMIDLLNLKPSKDFDESTGIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMSVGEKALKALFELE
Template Known Secondary structure 




TTTTTTTTS
TT
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   175....180.........190.........200.........210.........220.........230.........240.........250....
 
   55....60.........70.........80.........90.........100.... .....110....
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Query Sequence  GERDNVVFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYTPE. . . . . . . . . . . . . . . . . . . . TKVRQQESFI
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Template Conservation               ....                                                               
Template Sequence  REGRLKMNVFAYL. . . . SPELLDKLEELNLGKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELVMNKDEIV
Template Known Secondary structure  TT


S....
GGGT

S
SSS


TTTT
S

SS
BTTBTT




SS
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   255....260....... ..270.........280.........290.........300.........310.........320.........330
 
   115....120.........130.........140.........150.........160.........170.........180.........190....
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Query Sequence  HHIQIGRELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIVTFRNAEQLRDAARY
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Template Conservation                                                      
                           
Template Sequence  EVIERAKPLGLDVAVHAIGDKAVDVALDAFEEAEFSGRIEHASLVRDDQLERIKELKVRISAQPHFIVSDWWIVNRVGEE
Template Known Secondary structure  GGGT

STT




B

T

T
TT
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   331........340.........350.........360.........370.........380.........390.........400.........410
 
   195... .200.........210.........220.........230... ......240.........250.......
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Query Sequence  VPLD. . . . . . . . . . . RLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAV. . . . . . LKGVAVEELAQVTTDNFARLFHID
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Template Sequence  RAKWAYRLKTLSSITKLGFSTDSP. . . . . . . . . . . IEPADPWVSIDAAVNRYVVDPGERVSREEALHLYTHGSAQVTLAE
Template Known Secondary structure  GGGB

S


TTT...........TS




SS
GGG


TTTT
T
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   411........420.........430.... .....440.........450.........460.........470.........
 
   258 .260.....
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Query Sequence  A. SRLQSIR
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Template Conservation    
 
  
 
Template Sequence  DLGKLERGF
Template Known Secondary structure  T
S

STTS
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   480........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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