Job Description P0AFQ7 Confidence 87.33% Date Thu Jan 5 11:27:00 GMT 2012 Rank 145 Aligned Residues 173 % Identity 14% Template c2w9mB_ PDB info PDB header:dna replication Chain: B: PDB Molecule:polymerase x; PDBTitle: structure of family x dna polymerase from deinococcus2 radiodurans Resolution 2.46 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	H	C	H	L	D	G	L	D	Y	E	S	L	H	K	D	V	D	D	V	L	A	K	A	A	A	R	D	V	K	F	C	L	A	V	A	T	T	L	P	G	Y	L	H	M	R	D	L	V	G	E	R	D	N	V	V	F	S	C	G	V	H	P	L	N	Q	N	D	P	Y	D	V	E	D	L	R	R	L	A
Query Conservation
Alig confidence								.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	I	H	T	H	S	.	.	.	T	W	S	D	G	G	A	S	I	R	E	M	A	E	A	T	L	T	L	G	H	E	F	L	G	T	A	D	H	S	R	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	Y	A	N	G	L	T	I	E	R	L	R	E	Q	L	K	E	I	R
Template Known Secondary structure								.	.	.	T	T	T	T		S	S												T	T		S								B	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T		B
Template Predicted Secondary structure								.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		330	.	.	.	.	.				.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.																				.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																													.					.	.	.
Query SS confidence																																													.					.	.	.
Query Sequence		A	E	E	G	V	V	A	L	G	E	T	G	L	D	Y	Y	Y	T	P	E	T	K	V	R	Q	Q	E	S	F	I	H	H	I	Q	I	G	R	E	L	N	K	P	V	.	I	V	H	T	.	.	.	R	D	A	R	A	D	T	L	A	I	L	R	E	E	K	V	T	D	C	G	G	V	L	H	C	F	T	E	D
Query Conservation																																													.					.	.	.
Alig confidence																													.	.	.	.	.	.											.					.	.	.
Template Conservation																													.	.	.	.	.	.
Template Sequence		E	L	Q	R	A	G	L	P	I	V	A	G	S	E	V	D	I	L	D	D	G	S	L	D	F	P	D	.	.	.	.	.	.	D	V	L	G	E	L	D	Y	V	V	V	S	V	H	S	N	F	T	L	D	A	A	R	Q	T	E	R	L	I	R	A	V	S	H	P	L	V	T	V	L	G	H	A	T	G	R	L
Template Known Secondary structure						T	T											B		T	T	S		B	S	S			.	.	.	.	.	.				T	T	S	S								S		T	T	S														T		S	S						S	T	T			B
Template Predicted Secondary structure																													.	.	.	.	.	.
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.							.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
		161												.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	.	.	.	.	.	.	.	.	.	.	.	E	T	A	G	K	L	L	D	L	G	F	Y	I	S	F	S	G	I	V	T	F	R	N	A	E	Q	L	R	D	A	A	R	Y	V	P	L	D	R	L	L	V	E	T	D	S
Query Conservation			.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation																																																	.
Template Sequence		L	L	R	R	P	G	Y	A	L	D	L	D	A	V	L	G	A	C	E	A	N	G	T	V	V	E	I	N	A	N	A	A	R	L	D	L	D	W	R	E	A	L	R	W	R	E	R	.	L	K	F	A	I	N	T	D	A
Template Known Secondary structure		T	T	T	B																		T								S	T	T	T		B	S									T	T	T	.
Template Predicted Secondary structure																																																	.
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.		.	510	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions