Job Description P0AFQ7 Confidence 98.48% Date Thu Jan 5 11:27:00 GMT 2012 Rank 113 Aligned Residues 245 % Identity 14% Template c2p9bA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:possible prolidase; PDBTitle: crystal structure of putative prolidase from2 bifidobacterium longum Resolution 1.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.																.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	D	S	H	C	H	L	D	G	L	D	Y	E	S	L	H	K	D	V	D	D	V	L	A	K	A	A	A	R	D	V	K	F	C	L	A	V	A	T	T	L	P	G	Y	L	H	M	R	D	L	V	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	N	V	V	F	S	C	G	V	H
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence		L	I	N	A	H	T	H	L	F	S	Y	X	A	A	T	.	.	.	.	V	K	H	N	A	T	T	L	L	E	S	G	V	T	T	I	R	T	L	G	D	V	G	Y	E	V	V	T	L	R	D	Q	I	D	A	G	Q	I	L	G	P	R	I	L	A	S	G	P	L	X	A	I	P	E	G	H	G	A	P	L	I
Template Known Secondary structure									S								.	.	.	.											T	T							S			S	S	S											T	T	S	S										S							S	S
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	N	Q	N	D	P	Y	D	V	E	D	L	R	R	L	A	A	E	E	G	V	V	A	L	G	E	T	G	L	D	Y	Y	Y	T	P	E	T	K	V	R	Q	Q	E	S	F	I	H	H	I	Q	I	G	R	E	L	N	K	P	V	I	V	H	T	R	D	A	R	A	D	T	L	A	I	L	R	E	E	K	V
Query Conservation
Alig confidence																																																																																	.
Template Conservation																																																																																	.
Template Sequence		A	L	T	S	G	T	P	E	E	A	R	T	A	V	A	Q	N	L	K	A	G	V	N	A	I	K	I	A	A	T	G	G	V	T	D	A	Q	E	I	Q	X	S	V	E	Q	X	R	A	I	C	D	E	A	H	Q	Y	G	V	I	V	G	A	H	A	Q	S	P	E	G	V	R	R	S	L	L	A	G	V	D	.
Template Known Secondary structure					S																T	T		S							S			T	T	S																					T	T									S											T		S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.																															.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	D	C	G	G	V	L	H	C	F	T	E	D	R	E	T	A	G	K	L	L	D	L	G	F	Y	I	S	F	S	G	I	V	T	F	R	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	L	R	D	A	A	R	Y	V	P	L
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation		.	.	.	.																																																																												.
Template Sequence		.	.	.	.	T	I	E	H	G	S	V	L	D	D	E	L	I	G	X	F	R	H	N	P	N	A	L	R	G	Y	S	A	L	I	P	T	L	S	A	G	L	P	L	T	L	L	G	Q	D	V	T	G	I	T	D	I	Q	L	E	N	S	K	N	V	V	G	G	X	V	S	G	A	R	Q	A	H	E	A	G	.
Template Known Secondary structure		.	.	.	.																				T	T	S	T	T	S																	S																																T	T	.
Template Predicted Secondary structure		.	.	.	.																																																																												.
Template SS confidence
						263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		D	R	L	L	V	E	T	D	S	P	Y	L	A	P	V	P	H	R	G	K	E	N	Q	P	A	M	V	R	D	V	A	E	Y	M	A	V	L	K	G	V	A	V	E	E	L	A	Q	V	T	T	D	N	F	A	R	L	F	H	I	D	A	.	.	S	R	L	Q	S	I	R
Query Conservation																																																															.	.
Alig confidence															.	.	.	.	.	.	.	.																																									.	.
Template Conservation															.	.	.	.	.	.	.	.
Template Sequence		L	X	I	G	V	G	T	D	T	G	X	T	F	.	.	.	.	.	.	.	.	V	P	Q	Y	A	T	W	R	E	L	E	L	L	V	A	Y	A	G	F	S	P	A	E	A	L	H	A	A	T	A	V	N	A	S	I	L	G	V	D	A	E	T	G	S	L	E	V	G	K
Template Known Secondary structure				B						T	T	S	T	T	.	.	.	.	.	.	.	.	S		T	T																									T							T	T		T	T	T	S	S	S			T	T	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350									.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions