Job Description P0AFQ7 Confidence 99.02% Date Thu Jan 5 11:27:00 GMT 2012 Rank 77 Aligned Residues 240 % Identity 12% Template c2i5gB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:amidohydrolase; PDBTitle: crystal strcuture of amidohydrolase from pseudomonas2 aeruginosa Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	F	L	V	D	S	H	C	H	L	D	G	L	D	Y	E	S	L	H	K	D	V	D	D	V	L	A	K	A	A	A	R	D	V	K	F	C	L	A	V	A	T	T	L	P	G	Y	L	H	M	R	D	L	V	G	E	R	D	N	V	V	F	S	C	G	V	H	P	L	N	Q	N	D	P	Y	D	V	E	D	L
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.
Template Sequence		S	I	V	I	D	G	L	I	I	A	.	.	.	.	.	.	.	.	.	K	W	N	R	E	L	F	E	D	X	R	K	G	G	L	T	A	A	N	C	T	V	S	V	W	E	G	F	Q	A	T	V	N	N	I	T	A	S	N	K	L	I	R	D	N	S	D	L	V	I	P	V	R	S	T	A	D	I	R	K	A
Template Known Secondary structure		S										.	.	.	.	.	.	.	.	.			S	T	T	T	T	T					T	T										S	S																				T	T	T	T					S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20										.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		81	.	.																				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.										110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.																					.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.																					.
Query Sequence		R	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	E	E	G	V	V	A	L	G	E	T	G	L	D	Y	Y	Y	T	P	E	T	K	V	R	Q	.	.	.	.	.	.	.	.	.	Q	E	S	F	I	H	H	I	Q	I	G	R	E	L	N	K	P	V	I	V	.	H	T
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.																					.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		K	E	Q	G	K	T	G	I	L	Y	G	F	Q	N	A	H	A	F	E	D	Q	I	G	Y	V	E	V	F	K	Q	L	G	V	G	I	V	Q	X	C	Y	N	T	Q	N	L	V	G	T	G	C	Y	E	R	D	G	G	L	S	G	F	G	R	E	I	V	A	E	X	N	R	V	G	I	X	C	D	L	S	H	V
Template Known Secondary structure					T									S		G	G	G	G	T	T		T									T	T						S			S	S			S	S				T	T	S																				T						T	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.											.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.											.	.	190	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Query Sequence		R	D	A	R	A	D	T	L	A	I	L	R	E	E	K	V	T	D	C	G	G	V	L	H	C	F	.	.	.	.	.	.	.	.	.	.	T	E	D	R	E	T	A	G	K	L	L	D	L	G	F	Y	I	S	F	S	G	I	V	T	F	R	N	A	E	Q	.	.	.	.	.	.	.	.	.	.	L	R	D	A
Query Conservation																												.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.															.	.	.							.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.															.	.	.
Template Sequence		G	.	.	S	K	T	S	E	E	V	I	L	E	S	K	K	P	.	.	.	V	C	Y	S	H	C	L	P	S	G	L	K	E	H	P	R	N	K	S	D	E	E	L	K	F	I	A	D	H	G	G	F	V	G	V	T	X	F	A	P	F	L	K	K	G	I	D	S	T	I	D	D	Y	A	E	A	I	E	Y	V
Template Known Secondary structure			.	.	T	T										S	S		.	.	.								B	T	T	T	S			T	T	S	B											T	T									G	G	G	S	T	T	G	G	G		B
Template Predicted Secondary structure			.	.															.	.	.
Template SS confidence
		162			.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.																							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	Y	V	P	L	D	R	L	L	V	E	T	D	S	P	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	V	P	H	R	G	K	E	N	Q	P	A	M	V	R	D	V	A	E	Y	M	A	V	L	K	G	V	A	V	E	E	L	A	Q	V	T	T	D	N
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																																																																			.
Template Sequence		X	N	I	V	G	E	D	A	I	G	I	G	T	D	F	T	Q	G	H	G	H	D	F	F	E	W	L	T	H	D	K	G	Y	A	R	R	L	T	N	F	G	K	I	V	N	P	L	G	I	R	T	V	G	E	F	P	N	L	T	E	T	L	L	K	R	.	G	X	P	E	R	V	V	R	K	V	X	G	E	N
Template Known Secondary structure							T	T	S							B		T	T											B	G	G	G	T	S	S	B						S					B	T		S	S	G	G	G	T										T	.	T											T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.	.	.	.
		250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	R	L	F	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	V	R	V	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions