Job Description P0AFQ7 Confidence 35.85% Date Thu Jan 5 11:27:00 GMT 2012 Rank 166 Aligned Residues 110 % Identity 20% Template c1xuzA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol Resolution 2.20 Å

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		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.									160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.																									.	.	.	.	.	.	.	.												.	.
Query SS confidence																								.	.	.	.																									.	.	.	.	.	.	.	.												.	.
Query Sequence		I	H	H	I	Q	I	G	R	E	L	N	K	P	V	I	V	H	T	R	D	A	R	.	.	.	.	A	D	T	L	A	I	L	R	E	E	K	V	T	D	C	G	G	V	L	H	C	F	T	E	.	.	.	.	.	.	.	.	D	R	E	T	A	G	K	L	L	D	L	.	.	G	F	Y	I	S	F	S	G	I
Query Conservation																								.	.	.	.																									.	.	.	.	.	.	.	.												.	.
Alig confidence																								.	.	.	.															.	.									.	.	.	.	.	.	.	.												.	.
Template Conservation																																										.	.
Template Sequence		Y	P	L	I	K	L	V	A	S	F	G	K	P	I	I	L	S	T	G	M	N	S	I	E	S	I	K	K	S	V	E	I	I	R	E	A	G	V	P	Y	.	.	A	L	L	H	C	T	N	I	Y	P	T	P	Y	E	D	V	R	L	G	G	M	N	D	L	S	E	A	F	P	D	A	I	I	G	L	S	D	H
Template Known Secondary structure										T	T		S							T	T																	T				.	.									S	S								T	T										T	T	S
Template Predicted Secondary structure																																										.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.							.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.
Query Sequence		V	T	F	R	N	A	E	Q	L	R	D	A	A	.	.	.	.	.	.	R	Y	V	P	L	D	R	L	L	V	E	T	D	S	P	Y	L	A	P	V	P	H	R	G	K	E	N	Q	P	A	M	V	R	D	V	A	E	Y	M	A	V	L
Query Conservation															.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.
Template Sequence		T	L	D	N	Y	A	C	L	G	A	V	A	L	G	G	S	I	L	E	R	H	F	T	D	R	M	D	R	P	G	P	D	I	V	C	S	M	.	.	.	.	.	.	.	.	.	N	P	D	T	F	K	E	L	K	Q	G	A	H	A	L
Template Known Secondary structure		S	S	S	S										T								B		S		T	T			S	T	T	G	G	G		B	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.										.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions