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Job DescriptionP0AFQ7
Confidence98.93%DateThu Jan 5 11:27:00 GMT 2012
Rank84Aligned Residues262
% Identity17%Templatec1gkpD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:hydantoinase; PDBTitle: d-hydantoinase (dihydropyrimidinase) from thermus sp. in2 space group c2221
Resolution1.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20 .........30.........40. .....
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Query Sequence  LVDSHCHLDGLDYESLHK. DVDDVLAKAAARDVKFCLAVA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TTLPG
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Template Sequence  FIDPHVHIYLPFMATFAKDTHETGSKAALMGGTTTYIEMCCPSRNDDALEGYQLWKSKAEGNSYCDYTFHMAVSKFDEKT
Template Known Secondary structure 
SS
TT
S

TT


TTS
TTT
SS




S
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   55....60.........70.........80.........90.........100.........110.........120.........130....
 
   47..50.........60.........70.........80.........90.. .......100.......
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Query Sequence  YLHMRDLVGERDNVVFSCGVHPLNQNDPYDVEDLRRLAAEEGVVAL. . . . . . . . . . . . . . . . . . . GETGLDYYYTPETKV
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Template Sequence  EGQLREIVADGISSFIFLSYKNFFGVDDGEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLLSEGKTGPEWHEPSRPEA
Template Known Secondary structure  TT

B

SSTTTTB

T
BS
TT

SGGGTGGGS
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   135....140.........150.........160.........170.........180.........190.........200.........210....
 
   108.110.........120.........130...... ...140.........150.... .....160.........170.........180....
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Query Sequence  RQQESFIHHIQIGRELNKPVIVHTRDARA. . DTLAILREEKVTDCGGVL. HCFTEDRETAGKLLDLGFYISFSGIVTFRN
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Template Sequence  VEAEGTARFATFLETTGATGYVVHLSCKPALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGGVEAMKYIMSPPLRDKR
Template Known Secondary structure  T


S

STT



GGGGGS
TT

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T
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   216...220.........230.........240.........250.........260.........270.........280.........290.....
 
   185....190.........200.........210 .........220.........230.........240.........250...
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Query Sequence  AEQLRDAARYVPLDRLLVETDSPYLA. . . . . . . . . . . PVPHRGKENQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARL
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Template Sequence  NQKVLWDALAQG. FIDTVGTDHCPFDTEQKLLGKEAFTAIPNGIPAIEDRVNLLYTYGVSRGRLDIHRFVDAASTKAAKL
Template Known Secondary structure  TT.SS


B



GGGSS
GGGS


B

TTTTTTSSS

T
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   296...300....... ..310.........320.........330.........340.........350.........360.........370....
 
   254.... .260.....
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Query Sequence  FHIDA. . SRLQSIR
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Template Sequence  FGLFPRKGTIAVGS
Template Known Secondary structure  TT
TTTSSS
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   375....380........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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