Job Description P0AFQ7 Confidence 97.52% Date Thu Jan 5 11:27:00 GMT 2012 Rank 134 Aligned Residues 235 % Identity 17% Template c1fwcC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:urease; PDBTitle: klebsiella aerogenes urease, c319a variant at ph 8.5 Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.											.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	D	S	H	C	H	L	D	G	L	D	Y	E	S	L	H	K	D	V	D	D	V	L	A	K	A	A	A	R	D	V	K	F	C	L	A	V	A	.	.	.	.	.	.	.	.	.	.	T	T	L	P	G	Y	L	H	M	R	D	L	V	G	E	R	D	N	V	V	F	S	C	G	V	H	P	L	N	Q	N
Query Conservation																																									.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	D	T	H	I	H	W	I	C	P	.	.	.	.	.	.	.	.	.	.	Q	Q	A	E	E	A	L	V	S	G	V	T	T	M	V	G	G	G	T	G	P	A	A	G	T	H	A	T	T	C	T	P	G	P	W	Y	I	S	R	M	L	Q	A	A	D	S	L	P	V	N	I	G	L	L	G	K	G	N	V
Template Known Secondary structure										S		T	.	.	.	.	.	.	.	.	.	.										T										S	S																								T	T	S	S	S					B
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140											.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	Y	D	V	E	D	L	R	R	L	A	A	E	E	G	V	V	A	L	G	E	T	G	L	D	Y	Y	Y	T	P	E	T	K	V	R	Q	Q	E	S	F	I	H	H	I	Q	I	G	R	E	L	N	K	P	V	I	V	H	T	R	D	A	R	A	D	T	L	A	I	L	R	E	E	K	V	T	D	C	G	G
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Q	P	D	A	L	R	E	Q	V	A	A	G	V	I	G	L	I	.	.	.	.	.	.	.	.	.	.	.	.	H	E	D	W	G	A	T	P	A	A	I	D	C	A	L	T	V	A	D	E	M	D	I	Q	V	A	L	H	S	D	T	L	N	E	S	G	F	V	E	D	T	L	A	A	I	G	G	R	T	I
Template Known Secondary structure		S												T		S	B			.	.	.	.	.	.	.	.	.	.	.	.	B	G	G	G																		T		B				B			T	T		S	S											T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.													.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		153	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																																					190	.	.
Predicted Secondary structure								.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	H	C	F	T	.	.	.	.	E	D	R	E	T	A	G	K	L	L	D	L	G	F	Y	I	S	F	S	G	I	V	T	F	R	N	A	E	Q	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	A
Query Conservation								.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	T	F	H	T	E	G	A	G	G	G	H	A	P	D	I	I	T	A	C	A	H	P	N	I	L	P	S	S	T	N	P	T	L	P	Y	T	L	N	T	I	D	E	H	L	D	M	L	M	V	A	H	H	L	D	P	D	I	A	E	D	V	A	F	A	E	S	R	I	R	R	E	T	I	A	A	E	D	V	L
Template Known Secondary structure				T	T	T	T	S	T	T	S	S	S	T	T	T	G	G	G	G	G	G	S	T	T							S	T	T	S	S		B	T	T														T			T	T	S									T	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.												.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.			.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		R	Y	V	P	L	D	R	L	L	V	E	T	D	S	P	Y	L	A	P	V	P	H	R	G	K	E	N	Q	P	A	M	V	R	D	V	A	E	Y	M	A	V	L	K	G	.	.	.	.	.	.	.	.	.	.	.	V	A	V	E	E	L	A	Q	V	T	T	D	N	F	A	R	L	F	H	I	D	A	.	.	S
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.																							.	.
Alig confidence						.																			.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation						.																			.	.	.	.	.
Template Sequence		H	D	L	G	.	A	F	S	L	T	S	S	D	S	Q	A	M	G	R	V	G	E	V	.	.	.	.	.	I	L	R	T	W	Q	V	A	H	R	M	K	V	Q	R	G	A	L	A	E	E	T	G	D	N	D	N	F	R	V	K	R	Y	I	A	K	Y	T	I	N	P	A	L	T	H	G	I	A	H	E	V	G
Template Known Secondary structure				T	T	.	S	S							T	T	S	S	S		T	T			.	.	.	.	.																	S		T	T			S	S	S											T	T	T							T	T		T	T	T	S	S
Template Predicted Secondary structure						.																			.	.	.	.	.
Template SS confidence
		349	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370						.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
		260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	Q	S	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	E	V	G	K
Template Known Secondary structure		S	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions