Job Description P15373 Confidence 19.44% Date Thu Jan 5 11:34:46 GMT 2012 Rank 67 Aligned Residues 91 % Identity 16% Template c2wbmA_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:ribosome maturation protein sdo1 homolog; PDBTitle: crystal structure of mthsbds, the homologue of the2 shwachman-bodian-diamond syndrome protein in the3 euriarchaeon methanothermobacter thermautotrophicus Resolution 1.75 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	G	Q	T	T	I	P	A	P	V	R	E	A	L	K	L	K	P	G	Q	D	S	I	H	Y	E	I	L	P	G	G	Q	V	F	M	C	R	L	G	D	E	Q	E	D	H	T	M	N	A	F	L	R	F	L	D	A	D	I	Q	N	N	P	Q	K	T	R	P	F	N	I	Q	Q	G	K	K	L	V	A	G
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		R	K	G	D	K	A	S	E	E	A	M	R	K	V	F	E	T	A	D	P	.	L	E	V	T	P	V	I	L	R	R	G	T	I	Q	L	T	A	E	Q	R	R	Q	M	I	E	D	K	R	L	K	I	I	N	K	I	A	R	E	A	I	N	P	Q	N	G	L	P	H	P	P	K	R	I	E	K	A	M	E	E
Template Known Secondary structure		T	T	T													S					.											S																															T	T	T
Template Predicted Secondary structure																						.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		99	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	V	N	I	D	D	E	I	G	D	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	V	H	V	D	P	F	K	T	V	D
Template Known Secondary structure		T	T					S	S	S
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions