Job Description P78285 Confidence 36.79% Date Thu Jan 5 12:33:12 GMT 2012 Rank 28 Aligned Residues 135 % Identity 21% Template d2nr7a1 SCOP info Lysozyme-like Lysozyme-like NMB1012-like Resolution 1.30

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.								.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.		.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.																								.	.													.
Query SS confidence																																			.	.	.	.	.	.	.																								.	.													.
Query Sequence		L	I	T	G	P	S	G	N	D	G	L	E	G	V	S	Y	I	P	Y	K	D	I	V	G	V	W	T	V	C	H	G	H	T	.	.	.	.	.	.	.	G	K	D	I	M	L	G	K	T	Y	T	K	A	E	C	K	A	L	L	N	K	D	L	.	.	A	T	V	A	R	Q	I	N	P	Y	I	K	.	V	D
Query Conservation																																			.	.	.	.	.	.	.																								.	.													.
Alig confidence																											.	.							.	.	.	.	.	.	.																								.	.													.
Template Conservation																											.	.
Template Sequence		V	K	L	L	L	P	Y	I	L	K	W	E	G	G	F	V	H	D	P	A	D	A	G	G	A	.	.	T	N	K	G	V	T	I	A	T	W	K	R	V	G	Y	D	K	D	G	D	G	D	I	D	V	E	D	L	K	L	L	T	D	D	D	V	L	N	R	V	L	K	P	F	Y	W	D	R	W	K	A	D	L
Template Known Secondary structure																					G	G	G	T			.	.										T	T	T	S	S		B		T	T	S	T	T				S		G	G	G	S									T					T	T	G	G	G	T	G	G	G
Template Predicted Secondary structure																											.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		94	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.															.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure				.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Query SS confidence				.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Query Sequence		I	P	.	E	T	T	R	G	A	L	Y	S	F	V	Y	N	V	G	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	R	T	S	T	L	L	R	K	I	N	Q	G	D	I	K	G	A	C	D	Q	L	R	R	W	T	Y	A	G	G	K	Q	W	K	G	L	M	T	R	R	.	.	.	.	.
Query Conservation				.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Alig confidence				.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.										.	.	.	.	.
Template Conservation																																																																	.	.	.
Template Sequence		I	E	S	Q	K	V	A	N	I	L	V	D	W	V	W	G	S	G	K	Y	G	I	V	I	P	Q	R	I	L	G	V	Q	A	D	G	I	V	G	N	K	T	L	Q	A	V	N	S	A	D	P	D	E	L	F	E	S	I	F	D	A	R	R	E	.	.	.	F	L	E	D	I	T	A	R	S	I	K	K	Y	E
Template Known Secondary structure			S																B	T											T	S				S													S																.	.	.
Template Predicted Secondary structure																																																																	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.
															154	.	.	.	.	.	160	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	E	R	E	V	C	L	W	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	S	I	G	R	K	A	T	E	R	E	L	L	R	H	T	N	K	R	F	L	R	G
Template Known Secondary structure					T	S											S	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions