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Job DescriptionP78285
Confidence100.00%DateThu Jan 5 12:33:12 GMT 2012
Rank1Aligned Residues165
% Identity99%Templatec3hdeA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:lysozyme; PDBTitle: crystal structure of full-length endolysin r21 from phage 21
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHTGKDIMLGKTYTKAECKALLNKDLA
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Template Sequence  MPPSLRKAVAAAIGGGAIAIASVLITGPSGNDGLEGVSYIPYKDIVGVWTVCHGHTGKDIMLGKTYTKAECKALLNKDLA
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GGG
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  TVARQINPYIKVDIPETTRGALYSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREIEREVC
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Template Sequence  TVARQINPYIKVDIPETMRGALYSFVYNVGAGNFRTSTLLRKINQGDIKGACDQLRRWTYAGGKQWKGLMTRREIEREIC
Template Known Secondary structure  GGG

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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   161....
Predicted Secondary structure 


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Query Sequence  LWGQQ
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Template Conservation 
 
  
Template Sequence  LWGQQ
Template Known Secondary structure  TGGG
Template Predicted Secondary structure 


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   161....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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