Job Description P78285 Confidence 99.94% Date Thu Jan 5 12:33:12 GMT 2012 Rank 24 Aligned Residues 133 % Identity 26% Template c1pdlC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:tail-associated lysozyme; PDBTitle: fitting of gp5 in the cryoem reconstruction of the2 bacteriophage t4 baseplate Resolution 12.00 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																						.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	P	S	G	N	D	G	L	E	G	V	S	Y	I	P	Y	K	D	I	V	G	V	W	T	V	C	H	G	H	T	G	K	D	I	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	T	Y	T	K	A	E	C	K	A	L	L	N	K	D	L	A	T	V	A	R	Q
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	E	M	L	R	R	D	E	G	L	R	L	K	V	Y	W	D	T	E	G	Y	P	T	I	G	I	G	H	L	I	M	K	Q	P	V	R	D	M	A	Q	I	N	K	V	L	S	K	Q	V	G	R	E	I	T	G	N	P	G	S	I	T	M	E	E	A	T	T	L	F	E	R	D	L	A	D	M	Q	R	D
Template Known Secondary structure										T				S	B					S	S	S					T	T	T			S		S	S																	S	S				T	T	T	T	B			T	T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		86	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.																										.
Query SS confidence									.	.	.	.	.																										.
Query Sequence		I	N	P	Y	I	K	V	.	.	.	.	.	D	I	P	E	T	T	R	G	A	L	Y	S	F	V	Y	N	V	G	A	G	N	F	R	T	S	.	T	L	L	R	K	I	N	Q	G	D	I	K	G	A	C	D	Q	L	R	R	W	T	Y	A	G	G	K	Q	W	K	G	L	M	T	R	R	E	I	E	R	E	V
Query Conservation									.	.	.	.	.																										.
Alig confidence									.	.	.	.	.																										.																									.	.					.	.	.
Template Conservation																																																																.	.					.	.	.
Template Sequence		I	K	S	H	S	K	V	G	P	V	W	Q	A	V	N	R	S	R	Q	M	A	L	E	N	M	A	F	Q	M	G	V	G	G	V	A	K	F	N	T	M	L	T	A	M	L	A	G	D	W	E	K	A	Y	K	A	G	R	D	S	L	W	Y	.	.	Q	Q	T	K	.	.	.	G	R	A	S	R	V	T	M	I
Template Known Secondary structure						T	T								S														T	T						T	T											T											S	S				.	.			S	T	.	.	.	T
Template Predicted Secondary structure																																																																.	.					.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.			.	.	320	.				.	.	.	.	.	.	.	.	330
		160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	W	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	T	G	N
Template Known Secondary structure			T	S	S
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions