Job Description P77150 Confidence 99.80% Date Wed Jan 25 15:21:10 GMT 2012 Rank 29 Aligned Residues 232 % Identity 20% Template d2fv7a1 SCOP info Ribokinase-like Ribokinase-like Ribokinase-like Resolution 2.10

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		2	.	.	.	.	.	.																									.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	N	I	L	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	S	H	V	V	Y	G	H	A	G	N	S	A	A	E	F	P	M	R	R	L	G	A	N	V	W	P	L	N	T	V	Q	F	S	N	H	T	Q	Y	G	K	W	T	G	C	V	M	P	P
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	A	V	V	V	V	G	S	C	M	T	D	L	V	S	L	T	S	R	L	P	K	T	G	E	T	I	H	G	H	K	F	F	I	G	F	G	G	K	G	A	N	Q	C	V	.	Q	A	A	R	L	G	A	M	T	S	M	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	K	V	G	K	D
Template Known Secondary structure				S																S	S				T	T						S																.					T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S
Template Predicted Secondary structure																																																.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.																.	.	.	.	.	.
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.																																																		.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	H	L	T	E	I	V	Q	G	I	A	A	I	D	K	L	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	D	A	V	L	S	G	Y	L	G	S	A	E
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	G	N	D	Y	I	E	N	L	K	Q	N	D	I	S	T	E	F	T	Y	Q	T	K	D	A	A	T	G	T	A	S	I	I	V	N	N	E	G	Q	N	I	I	V	I	V	A	G	A	N	L	L	L	N	T	E	D	L	R	A	A	A	N	V	I	S	R	A	K	V	M	V	C	Q	L	E	I	T	P	A
Template Known Secondary structure													T	T	T				T	T					S	S	S											T	T	S									G	G	G	G	G									T								S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	E	H	I	L	G	I	V	R	Q	V	K	A	A	N	P	Q	A	K	Y	F	C	D	P	V	M	G	H	P	E	K	G	C	I	V	A	P	G	V	A	E	F	H	V	R	H	G	L	P	A	S	D	I	I	A	P	N	L	V	E	L	E	I	L	C	E	H	A	V	N	N	V	E	E	A	V	L	A	A
Query Conservation
Alig confidence														.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	S	L	E	A	L	T	M	A	R	R	S	.	.	.	.	.	G	V	K	T	L	F	N	P	A	P	A	I	A	D	L	.	.	.	.	.	.	.	.	.	.	.	.	D	P	Q	F	Y	T	L	S	D	V	F	C	C	N	E	S	E	A	E	I	L	T	G	L	T	V	G	S	A	A	D	A	G	E	A	A
Template Known Secondary structure													T	.	.	.	.	.	T									S			T	T		.	.	.	.	.	.	.	.	.	.	.	.		T					T		S														S	S				S
Template Predicted Secondary structure														.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180	.	.	.	.	.													.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.			.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		R	E	L	I	A	Q	G	P	Q	I	V	L	V	K	H	L	A	R	A	G	Y	S	R	D	R	F	E	M	L	L	V	T	A	D	E	A	W	H	I	S	R	P	L	V	D	F	G	M	R	Q	P	V	G	V	G	D	V	T	S	G	L	L	L	V	K	L	.	.	L	Q	G	A	T	L	Q	E	A	L	E	H
Query Conservation																																																																				.	.
Alig confidence																						.	.	.	.	.	.	.	.																																							.	.
Template Conservation																						.	.	.	.	.	.	.	.
Template Sequence		L	V	L	L	K	R	G	C	Q	V	V	I	I	T	L	G	A	E	G	C	.	.	.	.	.	.	.	.	V	V	L	S	Q	T	E	P	E	P	K	H	I	P	T	E	K	V	K	A	V	D	T	T	G	A	G	D	S	F	V	G	A	L	A	F	Y	L	A	Y	Y	P	N	L	S	L	E	D	M	L	N	R
Template Known Secondary structure						T	T	T		S							G	G	G			.	.	.	.	.	.	.	.					S	S			S												S			T	T																	T	T	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.									.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	A	V	Y	E	I	M	V	T	T	K	A	M	Q	E	Y	E	L	Q	V	V	A	A	Q	D	R	I	A
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		S	N	.	.	F	I	A	A	V	S	V	Q	A	A	G	T	Q	S	S	Y	P	Y	K	K	D	L	P	L	T	L
Template Known Secondary structure				.	.								T	S	S	S	G	G	G	G				G	G	G	S		G	G	G
Template Predicted Secondary structure				.	.
Template SS confidence
		294	.			.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions