Job Description P77150 Confidence 99.84% Date Wed Jan 25 15:21:10 GMT 2012 Rank 16 Aligned Residues 217 % Identity 20% Template d2f02a1 SCOP info Ribokinase-like Ribokinase-like Ribokinase-like Resolution 1.90

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																							40	.	.	.	.	.	.	.	.													.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	H	A	G	N	S	A	A	E	F	P	M	R	R	L	G	A	N	V	W	P	L	N	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	S	N	H	T	Q	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	K	W	T	G	C	V	M	P	P	S	H	L
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		G	G	K	G	L	N	V	T	R	.	V	I	H	D	L	G	G	D	V	I	A	T	G	V	L	G	G	F	H	G	A	F	I	A	N	E	L	K	K	A	N	I	P	Q	A	F	T	S	I	K	E	E	T	R	D	S	I	A	I	L	H	E	G	N	Q	T	E	I	L	E	A	G	P	T	V	S	P	E	E	I
Template Known Secondary structure			S								.						T																								T	T			B						S	S											T	T											B
Template Predicted Secondary structure											.
Template SS confidence
		36	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	I	V	Q	G	I	A	A	I	D	K	L	H	T	C	D	A	V	L	S	G	Y	L	G	S	A	E	Q	G	E	H	I	L	G	I	V	R	Q	V	K	A	A	N	P	Q	A	K	Y	F	C	D	P	V	M	G	H	P	E	K	G	C	I	V	A	P	G	V	A	E	F	H	V	R	H	G	L	P	A	S
Query Conservation
Alig confidence																		.																											.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.																											.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	N	F	L	E	N	F	D	Q	L	I	K	Q	A	E	I	.	V	T	I	S	G	S	L	A	K	G	L	P	S	D	F	Y	Q	E	L	V	Q	K	A	H	A	Q	.	.	E	V	K	V	L	L	D	T	S	.	.	.	.	.	.	.	.	.	.	.	.	G	D	S	L	R	Q	V	L	Q	G	P	W	K	P
Template Known Secondary structure													T	T		S		.					S				B	T	S		T	T												T	.	.	T									.	.	.	.	.	.	.	.	.	.	.	.	T									S	S
Template Predicted Secondary structure																		.																											.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.													.	.	.	.	170	.	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		D	I	I	A	P	N	L	V	E	L	E	I	L	C	E	H	A	V	N	.	.	N	V	E	E	A	V	L	A	A	R	E	L	I	A	Q	G	P	Q	I	V	L	V	K	H	L	A	R	A	G	Y	S	R	D	R	F	E	M	L	L	V	T	A	D	E	A	W	H	I	S	R	P	L	V	D	F	G	M	R	Q
Query Conservation																					.	.
Alig confidence																					.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	I	K	P	N	L	E	E	L	E	G	L	L	G	Q	D	F	S	E	N	P	L	A	A	V	Q	T	A	L	T	K	P	X	F	A	G	I	E	W	I	V	I	S	L	G	K	D	G	A	.	.	.	.	.	.	.	.	.	.	I	A	K	H	H	D	Q	F	Y	R	V	K	I	P	T	I	Q	A	K	N
Template Known Secondary structure		S					B									T					S	S										T	S	G	G	G	T	T		S							G	G	G			.	.	.	.	.	.	.	.	.	.					T	T													S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.											230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	G	V	G	D	V	T	S	G	L	L	L	V	K	L	L	Q	G	A	T	L	Q	E	A	L	E	H	V	T	A	A	V	Y	E	I	M	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	G	S	G	D	A	T	I	A	G	L	A	Y	G	L	A	K	D	A	P	A	A	E	L	L	K	W	G	X	A	A	G	X	A	N	A	Q	E
Template Known Secondary structure			T	T															T	T																				S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions