Job Description P77150 Confidence 100.00% Date Wed Jan 25 15:21:10 GMT 2012 Rank 7 Aligned Residues 237 % Identity 19% Template c3rm5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:hydroxymethylpyrimidine/phosphomethylpyrimidine kinase PDBTitle: structure of trifunctional thi20 from yeast Resolution 2.68 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	I	L	A	I	Q	S	H	V	V	Y	G	H	A	G	N	S	A	A	E	F	P	M	R	R	L	G	A	N	V	W	P	L	N	T	V	Q	F	S	N	H	T	Q	Y	G	K	W	T	G	C	V	M	P	P	S	H	L	T	E	I	V	Q	G	I	A	A	I	D	K	L	H	T	C	D	A	V	L	S	G
Query Conservation
Alig confidence																																													.																								.	.	.
Template Conservation																																													.																								.	.	.
Template Sequence		P	T	V	L	S	I	A	G	T	D	P	S	G	G	A	G	I	E	A	D	V	K	T	I	T	A	H	R	C	Y	A	M	T	C	I	T	A	L	N	A	Q	T	P	.	V	K	V	Y	S	I	N	N	T	P	K	E	V	V	F	Q	T	L	E	S	N	L	K	.	.	.	D	M	K	C	N	V	I	K	T	G
Template Known Secondary structure												T	T	S	S	S												T	T								S	B						S	.	S							B																.	.	.		S			S
Template Predicted Secondary structure																																													.																								.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		Y	L	G	S	A	E	Q	G	E	H	I	L	G	I	V	R	Q	V	K	A	A	N	P	Q	A	K	Y	F	C	D	P	V	M	G	H	P	E	K	G	C	I	V	A	P	G	V	A	E	F	H	V	R	H	G	L	P	A	S	D	I	I	A	P	N	L	V	E	L	E	I	L	C	E	.	.	H	A	V	N	N
Query Conservation																																																																											.	.
Alig confidence																								.	.	.												.	.	.	.	.	.	.	.																														.	.
Template Conservation																								.	.	.												.	.	.	.	.	.	.	.
Template Sequence		M	L	T	A	A	A	I	E	V	L	H	E	K	L	L	Q	L	G	E	N	R	P	.	.	.	K	L	V	V	D	P	V	L	V	A	K	.	.	.	.	.	.	.	.	D	I	V	S	L	I	T	E	K	V	A	P	F	A	D	I	L	T	P	N	I	P	E	C	Y	K	L	L	G	E	E	R	K	V	N	G
Template Known Secondary structure		S																	G	G	G			.	.	.												.	.	.	.	.	.	.	.										T	G	G	G		S					B								T	T	S					S	S
Template Predicted Secondary structure																								.	.	.												.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.									.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		V	E	E	A	V	L	A	A	R	E	L	I	A	Q	.	G	P	Q	I	V	L	V	K	H	L	A	R	A	G	Y	S	R	D	R	F	E	M	L	L	V	T	A	D	E	A	W	H	I	S	R	P	L	V	D	F	G	M	R	Q	P	V	G	V	G	D	V	T	S	G	L	L	L	V	K	L	L	Q	G	A	T
Query Conservation																.
Alig confidence																.														.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.
Template Sequence		L	Q	D	I	F	Q	I	A	K	D	L	A	K	I	T	K	C	S	N	I	L	V	K	G	G	H	I	T	.	.	.	.	.	.	.	.	D	V	L	F	L	G	A	E	Q	K	F	I	I	F	K	G	N	F	V	N	T	T	H	T	H	G	T	G	C	T	L	A	S	A	I	A	S	N	L	A	R	G	Y	S
Template Known Secondary structure																			S											.	.	.	.	.	.	.	.						T	T	T	T													S			B	T																T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.									.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	E	A	L	E	H	V	T	A	A	V	Y	E	I	M	V	T	T	K	A	M	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	Q	S	V	Y	G	G	I	E	Y	V	Q	N	A	V	A	I	G	C	D	V	T
Template Known Secondary structure																								S
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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