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Job DescriptionP77150
Confidence100.00%DateWed Jan 25 15:21:10 GMT 2012
Rank3Aligned Residues266
% Identity22%Templatec3mbjA_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative phosphomethylpyrimidine kinase; PDBTitle: crystal structure of a putative phosphomethylpyrimidine kinase2 (bt_4458) from bacteroides thetaiotaomicron vpi-5482 at 2.10 a3 resolution (rhombohedral form)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  MKNILAIQSHVVYGHAGNSAAEFPMRRLGANVWPLNTVQFSNHTQYGKWTGCVMPPSHLTEIVQGIAAIDKLHTCDAVLS
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Template Sequence  VKKIAAVHDLSGXGRVSLTVVIPILSSXGFQVCPLPTAVLSNHTQYPGFSFLDLTDEXPKIIAEWKKL. . . EVQFDAIYT
Template Known Secondary structure  S


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   6...10.........20.........30.........40.........50.........60.........70... ......80..
 
   82.......90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  GYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEILCEHAVN. .
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Template Sequence  GYLGSPRQIQIVSDFIKDFR. . QPDSLIVADPVLGDNGRLYTNFDXEXVKEXRHLITKADVITPNLTELFYLLDEPYKAD
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   83......90.........100.. .......110.........120.........130.........140.........150.........160
 
   160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  . NVEEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQPVGVGDVTSGLLLVKLLQGA
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Template Sequence  STDEELKEYLRLLSDKGPQVVIITSVPVHH. . . KTSVYAYNRQGNRYWKVTC. . PYLPAHYPGTGDTFTSVITGSLXQGD
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   161........170.........180.........190 .........200......... 210.........220.........230.....
 
   239240.........250.........260.........270.......
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Query Sequence  TLQEALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIAK
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Template Sequence  SLPXALDRATQFILQGIRATFGYEYDNREGILLEKVLHN
Template Known Secondary structure 
TS


GGG


GGG
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   239240.........250.........260.........270.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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