Job Description P77150 Confidence 99.63% Date Wed Jan 25 15:21:10 GMT 2012 Rank 55 Aligned Residues 224 % Identity 15% Template c3kd6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:carbohydrate kinase, pfkb family; PDBTitle: crystal structure of nucleoside kinase from chlorobium tepidum in2 complex with amp Resolution 1.88 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.									.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.
Query Sequence		E	F	P	M	R	R	L	G	A	N	V	W	P	L	.	.	.	.	.	.	.	.	N	T	V	Q	F	S	N	H	T	Q	Y	G	K	W	T	G	C	V	M	P	P	S	H	L	T	E	I	V	Q	G	I	A	A	I	D	K	L	H	T	C	D	A	V	L	S	G	Y	L	G	S	A	E	Q	G	E	H	I	L
Query Conservation																.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.																																					.	.													.	.	.	.
Template Conservation																																																												.	.													.	.	.	.
Template Sequence		F	D	L	L	H	A	K	N	I	D	T	R	G	I	Q	V	I	E	D	G	K	T	F	R	W	A	G	R	Y	H	Y	D	X	N	T	R	D	T	L	D	T	Q	L	N	V	F	A	E	F	D	P	H	V	P	Q	Y	Y	R	.	.	D	S	K	F	V	C	L	G	N	I	D	P	.	.	.	.	E	L	Q	L
Template Known Secondary structure								T	T										T	T												T	T	S	S										G	G	G	T	T							G	G	G	T	.	.	T		S						S	S			.	.	.	.
Template Predicted Secondary structure																																																												.	.													.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.					.	130	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	V	R	Q	V	K	A	A	N	P	Q	A	K	Y	F	C	D	P	V	M	G	H	P	E	K	G	C	I	V	A	P	G	V	A	E	F	H	V	R	H	G	L	P	A	S	D	I	I	A	P	N	L	V	E	L	E	I	L	C	E	H	A	V	N	N	V	E	E	A	V	L	A	A	R	E	L	I	A	Q
Query Conservation
Alig confidence											.	.																.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Conservation											.	.																.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Sequence		K	V	L	D	Q	I	D	D	P	.	.	K	L	V	V	C	D	T	X	N	F	W	I	E	G	K	.	.	.	.	.	.	.	.	.	P	E	E	L	K	K	V	L	A	R	V	D	V	F	I	V	N	D	S	E	A	R	L	L	S	G	D	.	.	.	.	.	P	N	L	V	K	T	A	R	I	I	R	E	X
Template Known Secondary structure					T	T		S	S		.	.	S															.	.	.	.	.	.	.	.	.									T	T		S														S		.	.	.	.	.	S											T	T
Template Predicted Secondary structure											.	.																.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.										.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240						.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.
Query Sequence		G	P	Q	I	V	L	V	K	H	L	A	R	A	G	Y	S	R	D	R	F	E	M	L	L	V	T	A	D	E	A	W	H	I	S	R	P	L	V	D	F	G	M	R	Q	P	V	G	V	G	D	V	T	S	G	L	L	L	V	K	L	L	Q	G	A	T	L	.	.	.	.	.	Q	E	A	L	E	H	V	T	A
Query Conservation																																																																				.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.																																												.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.
Template Sequence		G	P	K	T	L	I	I	K	K	G	E	H	G	A	.	.	.	.	.	.	.	.	.	L	L	F	T	D	N	G	I	F	A	A	P	A	F	P	L	E	S	I	Y	D	P	T	G	A	G	D	T	F	A	G	G	F	I	G	H	L	A	R	C	G	N	T	S	E	A	E	X	R	K	A	V	L	Y	G	S	A
Template Known Secondary structure		S		S							T	T	S			.	.	.	.	.	.	.	.	.					T	T									T	T				S			T	T																				S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210										.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	Y	E	I	M	V	T	T	K	A	M	Q	E	Y	E	L	Q	V	V	A	A	Q	D	R	I	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	A	S	F	C	V	E	Q	F	G	P	Y	R	Y	N	D	L	D	L	L	E	V	D	D	R	Y	Q	S
Template Known Secondary structure							T	T	S	S	T	T	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions