Job Description P77150 Confidence 99.80% Date Wed Jan 25 15:21:10 GMT 2012 Rank 32 Aligned Residues 217 % Identity 22% Template c3julA_ PDB info PDB header:transferase Chain: A: PDB Molecule:lin2199 protein; PDBTitle: crystal structure of listeria innocua d-tagatose-6-phosphate2 kinase bound with substrate Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																																			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		G	H	A	G	N	S	A	A	E	F	P	M	R	R	L	G	A	N	V	W	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	V	Q	F	S	N	H	T	Q	Y	G	K	W	T	.	.	.	G	C	V	M	P	P
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence											.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation											.
Template Sequence		G	G	K	G	L	H	V	S	G	.	V	L	S	K	F	G	I	K	N	E	A	L	G	I	A	G	S	D	N	L	D	K	L	Y	A	I	L	K	E	K	H	I	N	H	D	F	L	V	E	A	G	T	S	T	R	E	C	F	V	V	L	S	D	D	T	N	G	S	T	X	I	P	E	A	G	F	T	V	S	Q
Template Known Secondary structure			S								.					T	T											S	T	T											T	T			B						T	T												T	T		S
Template Predicted Secondary structure											.
Template SS confidence
		37	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	L	T	E	I	V	Q	G	I	A	A	I	D	K	L	H	T	C	D	A	V	L	S	G	Y	L	G	S	A	E	Q	G	E	H	I	L	G	I	V	R	Q	V	K	A	A	N	P	Q	A	K	Y	F	C	D	P	V	M	G	H	P	E	K	G	C	I	V	A	P	G	V	A	E	F	H	V	R	H	G	L
Query Conservation
Alig confidence																					.																											.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.																											.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	N	K	D	N	L	L	K	Q	I	A	K	K	V	K	K	E	D	X	.	V	V	I	A	G	S	P	P	P	H	Y	T	L	S	D	F	K	E	L	L	R	T	V	K	A	T	.	.	G	A	F	L	G	C	D	N	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	Y	L	N	L	A	V	E
Template Known Secondary structure																	T	T	S		.					S				T	T															T	T	.	.	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.																											.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.															170	.	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	S	D	I	I	A	P	N	L	V	E	L	E	I	L	C	E	H	A	V	N	N	V	E	E	A	V	L	A	A	R	E	L	I	A	Q	G	P	Q	I	V	L	V	K	H	L	A	R	A	G	Y	S	R	D	R	F	E	M	L	L	V	T	A	D	E	A	W	H	I	S	R	P	L	V	D	F	G	M	R
Query Conservation
Alig confidence																												.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	G	V	D	F	I	K	P	N	E	D	E	V	I	A	I	L	D	E	K	T	N	S	L	E	E	.	.	.	.	N	I	R	T	L	A	E	K	I	P	Y	L	V	V	S	L	G	A	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	C	A	H	N	G	K	L	Y	Q	V	I
Template Known Secondary structure			T		S					B									T			S	S					.	.	.	.							T	T		S							G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																												.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.																		.	.	.	.	.	230	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	V	G	V	G	D	V	T	S	G	L	L	L	V	K	L	L	Q	G	A	T	L	Q	E	A	L	E	H	V	T	A	A	V	Y	E	I	M	V	T	T	K	A	M	Q	E	Y	E	L	Q	V	V	A	A	Q
Query Conservation
Alig confidence																																			.	.
Template Conservation																																			.	.
Template Sequence		P	P	T	G	A	G	D	V	F	V	G	A	F	I	A	G	L	A	X	N	X	P	I	T	E	T	L	K	V	A	T	G	C	.	.	S	A	S	K	V	X	Q	Q	F	D	L	E	A	A	G	K	L	K	N	Q
Template Known Secondary structure																				T	T														.	.					T	T													T	T
Template Predicted Secondary structure																																			.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions