Job Description P77150 Confidence 99.65% Date Wed Jan 25 15:21:10 GMT 2012 Rank 54 Aligned Residues 211 % Identity 19% Template c3i3yB_ PDB info PDB header:transferase Chain: B: PDB Molecule:carbohydrate kinase; PDBTitle: crystal structure of ribokinase in complex with d-ribose from2 klebsiella pneumoniae Resolution 2.15 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																																	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	H	A	G	N	S	A	A	E	F	P	M	R	R	L	G	A	N	V	W	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	V	Q	F	S	N	H	T	Q	Y	G	K	W	T	G	C	V	M	P	P	S	H	L	T	E
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		G	G	K	G	A	N	Q	A	I	.	I	L	S	R	C	G	I	E	T	R	L	I	A	A	T	G	N	D	S	N	G	A	W	I	R	Q	Q	I	K	N	E	P	L	X	L	L	P	D	G	H	F	N	Q	H	S	D	T	S	I	I	L	A	D	G	N	A	I	I	T	T	T	A	A	A	D	T	F	S	L	D
Template Known Secondary structure											.					T	T											S	S											T	T	S	S					S	S	S			S	S																			T	T	T	T	T
Template Predicted Secondary structure											.
Template SS confidence
		37	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	Q	G	I	A	A	I	D	K	L	H	T	C	D	A	V	L	S	G	Y	L	G	S	A	E	Q	G	E	H	I	L	G	I	V	R	Q	V	K	A	A	N	P	Q	A	K	Y	F	C	D	P	V	M	G	H	P	E	K	G	C	I	V	A	P	G	V	A	E	F	H	V	R	H	G	L	P	A	S	D	I
Query Conservation
Alig confidence												.	.																											.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.																											.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	X	I	P	H	X	A	D	A	V	.	.	A	G	D	I	L	L	Q	Q	G	N	F	S	L	D	K	T	R	A	L	F	Q	Y	A	R	S	R	.	.	.	.	.	G	X	T	T	V	F	N	P	S	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	D	F	C	H	L	W	P	L	I	D	I
Template Known Secondary structure				G	G	G	G	T	T			.	.	T	T							S		S															T	.	.	.	.	.	T									S		.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	G	G		G	G	G		S
Template Predicted Secondary structure												.	.																											.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.						.	.	.	.	.	160	.	.	.	.	.														.	.	.	.	170	.	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	P	N	L	V	E	L	E	I	L	C	E	H	A	V	N	N	V	E	E	A	V	L	A	A	R	E	L	I	A	Q	G	P	Q	I	V	L	V	K	H	L	A	R	A	G	Y	S	R	D	R	F	E	M	L	L	V	T	A	D	E	A	W	H	I	S	R	P	L	V	D	F	G	M	R	Q	P	V	G	V
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	V	N	E	S	E	A	E	L	L	Q	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	K	T	L	V	I	T	Q	G	A	A	G	A	.	.	.	.	.	.	.	.	.	.	W	L	V	Q	E	G	Q	R	Q	F	C	P	A	V	P	A	E	A	L	D	T	T	G	A
Template Known Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S							T	T	S			.	.	.	.	.	.	.	.	.	.				S	S	S													S			T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.																			.	.	.	.	.	.	.	200	.	.	.	.	.	.											.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		G	D	V	T	S	G	L	L	L	V	K	L	L	Q	G	.	.	A	T	L	Q	E	A	L	E	H	V	T	A	A	V	Y	E	I	M	V	T	T	K	A	M	Q	E	Y	E	L	Q	V	V	A	A	Q	D	R	I	A
Query Conservation																	.	.
Alig confidence																	.	.												.	.
Template Conservation																														.	.
Template Sequence		G	D	T	F	L	A	V	X	L	A	S	A	L	L	R	G	V	A	P	D	A	L	A	L	A	H	A	S	.	.	R	A	A	A	I	T	V	S	R	R	G	T	L	S	A	F	P	G	S	R	E	L	A	A	L	L
Template Known Secondary structure																T	T	S		S										.	.							T	T	S		S	S	G	G	G	S										T
Template Predicted Secondary structure																														.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions