Job Description P77150 Confidence 99.68% Date Wed Jan 25 15:21:10 GMT 2012 Rank 48 Aligned Residues 210 % Identity 19% Template c3go6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribokinase rbsk; PDBTitle: crystal structure of m. tuberculosis ribokinase (rv2436) in2 complex with ribose and amp-pnp Resolution 1.98 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																																			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	H	A	G	N	S	A	A	E	F	P	M	R	R	L	G	A	N	V	W	P	L	N	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	S	N	H	T	Q	Y	G	K	W	T	G	C	V	M	P	P	S	H	L
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.
Template Sequence		G	G	K	G	A	N	Q	A	V	.	A	A	A	R	A	G	A	Q	V	Q	F	S	G	A	F	G	D	D	P	A	A	A	Q	L	R	A	H	L	R	A	N	A	V	G	L	D	R	T	V	T	V	P	G	P	S	G	T	A	I	I	V	V	D	A	S	A	E	N	T	V	L	V	A	P	G	A	N	A	H	L
Template Known Secondary structure											.					T	T											S	S													T	T		B		T	T					S	S											T	T										G	G	G	G	G
Template Predicted Secondary structure											.
Template SS confidence
		50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	I	V	Q	G	I	A	A	I	D	K	L	H	T	C	D	A	V	L	S	G	Y	L	G	S	A	E	Q	G	E	H	I	L	G	I	V	R	Q	V	K	A	A	N	P	Q	A	K	Y	F	C	D	P	V	M	G	H	P	E	K	G	C	I	V	A	P	G	V	A	E	F	H	V	R	H	G	L	P	A	S
Query Conservation
Alig confidence			.	.	.	.	.	.																																		.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.																																		.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Sequence		T	.	.	.	.	.	.	P	V	P	S	A	V	A	N	C	D	V	L	L	T	Q	L	E	I	P	V	A	T	A	L	A	A	A	R	A	A	Q	S	A	.	.	.	.	.	D	A	V	V	M	V	N	A	S	P	A	G	Q	D	R	.	.	.	.	.	.	.	.	.	.	S	S	L	Q	D	L	A	A	I	A
Template Known Secondary structure			.	.	.	.	.	.			G	G	G	G	T	T		S						S	S	S															T	.	.	.	.	.	T									S	S				T	.	.	.	.	.	.	.	.	.	.	G	G	G
Template Predicted Secondary structure			.	.	.	.	.	.																																		.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		129							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.											.	.	180	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	I	A	P	N	L	V	E	L	E	I	L	C	E	H	A	V	N	N	V	E	E	A	V	L	A	A	R	E	L	I	A	Q	G	P	Q	I	V	L	V	K	H	L	A	R	A	G	Y	S	R	D	R	F	E	M	L	L	V	T	A	D	E	A	W	H	I	S	R	P	L	V	D	F	G	M	R	Q	P	V
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.										.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.										.	.
Template Sequence		D	V	V	I	A	N	E	H	E	A	N	D	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	P	P	T	H	F	V	I	T	L	G	V	R	G	A	.	.	.	.	.	.	.	.	R	Y	V	G	A	D	G	V	F	.	.	E	V	P	A	P	T	V	T	P	V	D	T	A
Template Known Secondary structure		S											T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S			S							G	G	G			.	.	.	.	.	.	.	.					T	T				.	.										S			T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.										.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200																				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.									.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.					240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		G	V	G	D	V	T	S	G	L	L	L	V	K	L	L	Q	G	A	T	.	.	.	.	L	Q	E	A	L	E	H	V	T	A	A	V	Y	E	I	M	V	T	T	K	A	M	Q	E	Y	E	L	Q	V	V	A	A	Q	D	R	I	A	K
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.										.	.
Template Conservation																																		.	.
Template Sequence		G	A	G	D	V	F	A	G	V	L	A	A	N	W	P	R	N	P	G	S	P	A	E	R	L	R	A	L	R	R	A	C	.	.	A	A	G	A	L	A	T	L	V	S	G	V	G	D	C	A	P	A	A	A	A	I	D	A	A	L	R
Template Known Secondary structure		T													S			T	T															.	.							T	T	S	S	S	S	S	S
Template Predicted Secondary structure																																		.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions