Job Description P77150 Confidence 99.60% Date Wed Jan 25 15:21:10 GMT 2012 Rank 58 Aligned Residues 200 % Identity 17% Template c3gbuD_ PDB info PDB header:transferase Chain: D: PDB Molecule:uncharacterized sugar kinase ph1459; PDBTitle: crystal structure of an uncharacterized sugar kinase ph1459 from2 pyrococcus horikoshii in complex with atp Resolution 2.20 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	H	A	G	N	S	A	A	E	F	P	M	R	R	L	G	A	N	V	W	P	L	N	T	V	Q	F	S	N	H	T	Q	Y	G	K	W	T	G	C	V	M	P	P	S	H	L	T	E	I	V	Q	G	I	A	A	I	D	K	L	H	T	C	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	A	P	A	N	V	A	V	.	G	V	S	R	L	G	V	K	S	S	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	V	G	N	D	P	F	G	E	Y	L	I	E	E	L	S	K	E	N	V	D	T	R	G	I	V	K	D	E	K	K	H	T	G	I	V	F	V	Q	L	K	G
Template Known Secondary structure											.					T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S													T	T		B		T	T					S	S	S											S
Template Predicted Secondary structure											.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.																.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
																																		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	S	G	Y	L	G	S	A	E	Q	G	E	H	I	L	G	I	V	R	Q	V	K	A	A	N	P	Q	A	K	Y	F	C	D	P	V	M	G	H	P	E	K	G	C	I	V	A	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.																		.	.
Template Conservation																																																											.	.																		.	.
Template Sequence		A	S	P	S	F	L	L	Y	D	D	V	A	Y	F	N	X	T	L	N	D	I	N	W	D	I	V	E	E	A	K	I	V	N	F	G	S	V	I	L	A	R	N	P	S	R	E	T	V	X	K	V	I	K	K	I	K	G	.	.	S	S	L	I	A	F	D	V	N	L	R	L	D	L	W	R	G	.	.	Q	E
Template Known Secondary structure		S	S								S	S	G	G	G				G	G	G										S						S	G	G	G	G	S	T	T													B	T	.	.	T	B										G	G	G	G	T	T	.	.
Template Predicted Secondary structure																																																											.	.																		.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	A	E	F	H	V	R	H	G	L	P	A	S	D	I	I	A	P	N	L	V	E	L	E	I	L	C	E	H	A	V	N	N	V	E	E	A	V	L	A	A	R	E	L	I	A	Q	G	P	Q	I	V	L	V	K	H	L	A	R	A	G	Y	S	R	D	R	F	E	M	L	L	V	T	A	D	E	A	W	H
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	X	I	K	V	L	E	E	S	I	K	L	A	D	I	V	K	A	S	E	E	E	V	L	Y	L	E	N	Q	G	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	G	S	X	L	T	A	I	T	L	G	P	K	G	F	.	.	.	.	.	.	.	.	.	.	R	L	I	K	N	E	T	V
Template Known Secondary structure													T	T		S														T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.				S	S							G	G	G			.	.	.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.														.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.											.	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		I	S	R	P	L	V	D	F	G	M	R	Q	P	V	G	V	G	D	V	T	S	G	L	L	L	V	K	L	L	.	.	Q	G	A	T	L	Q	E	A	L	E	H	V	T	A	A	V	Y	E	I	M	V	T
Query Conservation																															.	.
Alig confidence																															.	.
Template Conservation
Template Sequence		V	D	V	P	S	Y	N	V	N	P	L	D	T	T	G	A	G	D	A	F	X	A	A	L	L	V	G	I	L	K	L	K	G	L	D	L	L	K	L	G	K	F	A	N	L	V	A	A	L	S	T	Q	K
Template Known Secondary structure												S			T	T																S	S	S																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions